STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB40BRAB40B, member RAS oncogene family. (278 aa)    
Predicted Functional Partners:
CUL5
CUL5 isoform 1; Belongs to the cullin family.
    
 
 0.847
RAB40C
RAB40C isoform 6.
  
 
  
0.808
WDR45B
WD repeat domain 45B.
   
  
 0.765
ENSPTRP00000075898
annotation not available
    
 
 0.712
LOC107968511
Elongin-C-like.
    
 
 0.712
ELOC
Transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C); Belongs to the SKP1 family.
    
 
 0.712
ELOC-2
Elongin C.
    
 
 0.712
LOC744141
Elongin-C-like.
    
 
 0.703
BEX5
Brain expressed X-linked 5.
      
 0.703
FTHL17
Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.
      
 0.674
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.