Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CS | ENSPTRP00000063012 | ENSPTRP00000008664 | ENSPTRP00000063012 | Citrate synthase, mitochondrial isoform X1. | annotation not available | 0.750 |
CS | FH | ENSPTRP00000008664 | ENSPTRP00000003656 | Citrate synthase, mitochondrial isoform X1. | Fumarate hydratase. | 0.959 |
CS | MCCC2 | ENSPTRP00000008664 | ENSPTRP00000029062 | Citrate synthase, mitochondrial isoform X1. | Methylcrotonoyl-CoA carboxylase 2 (Beta). | 0.436 |
CS | PCCB | ENSPTRP00000008664 | ENSPTRP00000068299 | Citrate synthase, mitochondrial isoform X1. | Propionyl-CoA carboxylase subunit beta. | 0.436 |
CS | RNF138 | ENSPTRP00000008664 | ENSPTRP00000016925 | Citrate synthase, mitochondrial isoform X1. | Ring finger protein 138. | 0.599 |
CS | SDHB | ENSPTRP00000008664 | ENSPTRP00000000434 | Citrate synthase, mitochondrial isoform X1. | Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). | 0.917 |
CS | SUCLG1 | ENSPTRP00000008664 | ENSPTRP00000020798 | Citrate synthase, mitochondrial isoform X1. | Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and specificity for either ATP or GTP is provided by different beta subunits. | 0.740 |
ENSPTRP00000063012 | CS | ENSPTRP00000063012 | ENSPTRP00000008664 | annotation not available | Citrate synthase, mitochondrial isoform X1. | 0.750 |
ENSPTRP00000063012 | ENSPTRP00000064929 | ENSPTRP00000063012 | ENSPTRP00000064929 | annotation not available | annotation not available | 0.750 |
ENSPTRP00000063012 | ENSPTRP00000080156 | ENSPTRP00000063012 | ENSPTRP00000080156 | annotation not available | annotation not available | 0.750 |
ENSPTRP00000063012 | ENSPTRP00000083212 | ENSPTRP00000063012 | ENSPTRP00000083212 | annotation not available | annotation not available | 0.750 |
ENSPTRP00000063012 | FH | ENSPTRP00000063012 | ENSPTRP00000003656 | annotation not available | Fumarate hydratase. | 0.498 |
ENSPTRP00000063012 | RNF138 | ENSPTRP00000063012 | ENSPTRP00000016925 | annotation not available | Ring finger protein 138. | 0.499 |
ENSPTRP00000063012 | SDHB | ENSPTRP00000063012 | ENSPTRP00000000434 | annotation not available | Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). | 0.759 |
ENSPTRP00000063012 | SUCLG1 | ENSPTRP00000063012 | ENSPTRP00000020798 | annotation not available | Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and specificity for either ATP or GTP is provided by different beta subunits. | 0.760 |
ENSPTRP00000064929 | ENSPTRP00000063012 | ENSPTRP00000064929 | ENSPTRP00000063012 | annotation not available | annotation not available | 0.750 |
ENSPTRP00000064929 | FH | ENSPTRP00000064929 | ENSPTRP00000003656 | annotation not available | Fumarate hydratase. | 0.678 |
ENSPTRP00000064929 | MCCC2 | ENSPTRP00000064929 | ENSPTRP00000029062 | annotation not available | Methylcrotonoyl-CoA carboxylase 2 (Beta). | 0.436 |
ENSPTRP00000064929 | PCCB | ENSPTRP00000064929 | ENSPTRP00000068299 | annotation not available | Propionyl-CoA carboxylase subunit beta. | 0.436 |
ENSPTRP00000064929 | RNF138 | ENSPTRP00000064929 | ENSPTRP00000016925 | annotation not available | Ring finger protein 138. | 0.599 |
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