CBLN2 protein (Pan troglodytes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Pan troglodytes

NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBLN2	CCDC88C	ENSPTRP00000017170	ENSPTRP00000011302	Cerebellin 2 precursor.	CCDC88C isoform 3.	0.589
CBLN2	CYP26B1	ENSPTRP00000017170	ENSPTRP00000080569	Cerebellin 2 precursor.	Cytochrome P450 family 26 subfamily B member 1; Belongs to the cytochrome P450 family.	0.605
CBLN2	GDF5	ENSPTRP00000017170	ENSPTRP00000023050	Cerebellin 2 precursor.	GDF5 isoform 1.	0.586
CBLN2	GNG4	ENSPTRP00000017170	ENSPTRP00000003602	Cerebellin 2 precursor.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.573
CBLN2	GRID1	ENSPTRP00000017170	ENSPTRP00000004712	Cerebellin 2 precursor.	Glutamate ionotropic receptor delta type subunit 1.	0.600
CBLN2	GRID2	ENSPTRP00000017170	ENSPTRP00000083033	Cerebellin 2 precursor.	Glutamate ionotropic receptor delta type subunit 2.	0.625
CBLN2	LMO1	ENSPTRP00000017170	ENSPTRP00000005817	Cerebellin 2 precursor.	LIM domain only 1.	0.679
CBLN2	NPY	ENSPTRP00000017170	ENSPTRP00000032455	Cerebellin 2 precursor.	Neuropeptide Y.	0.653
CBLN2	SPARCL1	ENSPTRP00000017170	ENSPTRP00000027929	Cerebellin 2 precursor.	SPARCL1 isoform 2.	0.602
CBLN2	SPON1	ENSPTRP00000017170	ENSPTRP00000083474	Cerebellin 2 precursor.	Spondin 1, extracellular matrix protein.	0.553
CCDC88C	CBLN2	ENSPTRP00000011302	ENSPTRP00000017170	CCDC88C isoform 3.	Cerebellin 2 precursor.	0.589
CCDC88C	CYP26B1	ENSPTRP00000011302	ENSPTRP00000080569	CCDC88C isoform 3.	Cytochrome P450 family 26 subfamily B member 1; Belongs to the cytochrome P450 family.	0.599
CYP26B1	CBLN2	ENSPTRP00000080569	ENSPTRP00000017170	Cytochrome P450 family 26 subfamily B member 1; Belongs to the cytochrome P450 family.	Cerebellin 2 precursor.	0.605
CYP26B1	CCDC88C	ENSPTRP00000080569	ENSPTRP00000011302	Cytochrome P450 family 26 subfamily B member 1; Belongs to the cytochrome P450 family.	CCDC88C isoform 3.	0.599
GDF5	CBLN2	ENSPTRP00000023050	ENSPTRP00000017170	GDF5 isoform 1.	Cerebellin 2 precursor.	0.586
GNG4	CBLN2	ENSPTRP00000003602	ENSPTRP00000017170	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Cerebellin 2 precursor.	0.573
GNG4	SPON1	ENSPTRP00000003602	ENSPTRP00000083474	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Spondin 1, extracellular matrix protein.	0.816
GRID1	CBLN2	ENSPTRP00000004712	ENSPTRP00000017170	Glutamate ionotropic receptor delta type subunit 1.	Cerebellin 2 precursor.	0.600
GRID1	GRID2	ENSPTRP00000004712	ENSPTRP00000083033	Glutamate ionotropic receptor delta type subunit 1.	Glutamate ionotropic receptor delta type subunit 2.	0.971
GRID2	CBLN2	ENSPTRP00000083033	ENSPTRP00000017170	Glutamate ionotropic receptor delta type subunit 2.	Cerebellin 2 precursor.	0.625