SBNO2 protein (Pan troglodytes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Pan troglodytes

NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee

Export your current network:

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same PNG format, but at higher resolution

... as a vector graphic:

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARHGEF28	SBNO2	ENSPTRP00000029088	ENSPTRP00000017317	ARHGEF28 isoform 4.	SBNO2 isoform 2.	0.497
ARID5A	SBNO2	ENSPTRP00000020966	ENSPTRP00000017317	AT rich interactive domain 5A (MRF1-like).	SBNO2 isoform 2.	0.569
GAL3ST4	SBNO2	ENSPTRP00000044837	ENSPTRP00000017317	GAL3ST4 isoform 2.	SBNO2 isoform 2.	0.572
GPR182	SBNO2	ENSPTRP00000050346	ENSPTRP00000017317	G protein-coupled receptor 182; Belongs to the G-protein coupled receptor 1 family.	SBNO2 isoform 2.	0.492
HOXC10	HOXC9	ENSPTRP00000008557	ENSPTRP00000008558	Homeobox protein Hox-C10.	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	0.892
HOXC10	MEGF11	ENSPTRP00000008557	ENSPTRP00000058590	Homeobox protein Hox-C10.	Multiple EGF like domains 11.	0.576
HOXC10	MLLT3	ENSPTRP00000008557	ENSPTRP00000062666	Homeobox protein Hox-C10.	MLLT3 isoform 1.	0.571
HOXC10	PKDCC	ENSPTRP00000008557	ENSPTRP00000020366	Homeobox protein Hox-C10.	PKDCC isoform 1.	0.486
HOXC10	SBNO2	ENSPTRP00000008557	ENSPTRP00000017317	Homeobox protein Hox-C10.	SBNO2 isoform 2.	0.517
HOXC10	THBS3	ENSPTRP00000008557	ENSPTRP00000002388	Homeobox protein Hox-C10.	Thrombospondin 3.	0.523
HOXC9	HOXC10	ENSPTRP00000008558	ENSPTRP00000008557	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	Homeobox protein Hox-C10.	0.892
HOXC9	MEGF11	ENSPTRP00000008558	ENSPTRP00000058590	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	Multiple EGF like domains 11.	0.578
HOXC9	MLLT3	ENSPTRP00000008558	ENSPTRP00000062666	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	MLLT3 isoform 1.	0.585
HOXC9	PKDCC	ENSPTRP00000008558	ENSPTRP00000020366	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	PKDCC isoform 1.	0.514
HOXC9	SBNO2	ENSPTRP00000008558	ENSPTRP00000017317	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	SBNO2 isoform 2.	0.525
HOXC9	THBS3	ENSPTRP00000008558	ENSPTRP00000002388	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	Thrombospondin 3.	0.500
MEGF11	HOXC10	ENSPTRP00000058590	ENSPTRP00000008557	Multiple EGF like domains 11.	Homeobox protein Hox-C10.	0.576
MEGF11	HOXC9	ENSPTRP00000058590	ENSPTRP00000008558	Multiple EGF like domains 11.	Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.	0.578
MEGF11	MLLT3	ENSPTRP00000058590	ENSPTRP00000062666	Multiple EGF like domains 11.	MLLT3 isoform 1.	0.592
MEGF11	PKDCC	ENSPTRP00000058590	ENSPTRP00000020366	Multiple EGF like domains 11.	PKDCC isoform 1.	0.606