STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMNB2LMNB2 isoform 1; Belongs to the intermediate filament family. (620 aa)    
Predicted Functional Partners:
LMNA
LMNA isoform 8; Belongs to the intermediate filament family.
    
0.992
LMNB1-2
LMNB1 isoform 1; Belongs to the intermediate filament family.
   
0.990
CASP6
Caspase 6, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family.
   
 0.957
LBR
Lamin B receptor.
   
 
 0.915
LMNB1
Lamin B1.
   
 
0.911
GZMB
GZMB isoform 2; Belongs to the peptidase S1 family.
    
 0.903
EMD
EMD isoform 1.
    
 0.867
LEMD3
LEM domain containing 3.
   
 0.771
SUN2
Sad1 and UNC84 domain containing 2.
    
 0.749
ENSPTRP00000006737
Barrier to autointegration factor 1.
   
 0.746
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.