STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYDGFChromosome 19 open reading frame 10. (173 aa)    
Predicted Functional Partners:
SSR4
Signal sequence receptor subunit 4.
   
  
 0.704
IL25
IL25 isoform 2.
      
 0.661
XBP1
XBP1 isoform 4.
   
 
  0.639
COPE
Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family.
   
  
 0.618
SDF2L1
Stromal cell-derived factor 2-like 1.
   
  
 0.518
SLC35B1
Solute carrier family 35 member B1.
   
    0.441
CRELD2
CRELD2 isoform 1.
   
  
 0.422
YARS1
YARS isoform 2.
   
  
 0.419
CALR
Calreticulin.
   
   0.410
HPCAL1
Hippocalcin-like protein 1.
    
   0.406
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.