STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MVB12AFamily with sequence similarity 125, member A. (273 aa)    
Predicted Functional Partners:
TSG101
Tumor susceptibility 101.
    
 0.997
VPS37B
Vacuolar protein sorting 37 homolog B.
   
 0.995
VPS28-2
VPS28 isoform 16; Belongs to the VPS28 family.
   
 0.985
VPS28
VPS28 subunit of ESCRT-I.
   
 0.985
PDCD6IP
Programmed cell death 6 interacting protein.
     
 0.947
MVB12B
Family with sequence similarity 125, member B.
    
0.947
VPS37A
Vacuolar protein sorting 37 homolog A.
   
 0.933
ENSPTRP00000070037
annotation not available
   
 0.933
VPS37C
Vacuolar protein sorting 37 homolog C.
   
 0.930
UEVLD
UEV and lactate/malate dehyrogenase domains.
    
 0.913
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.