STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPAS1Neuronal PAS domain protein 1. (590 aa)    
Predicted Functional Partners:
UBXN7
UBX domain-containing protein 7.
    
 0.817
ARNT
Aryl hydrocarbon receptor nuclear translocator.
    
0.768
EGLN3
Egl-9 family hypoxia inducible factor 3.
    
 0.767
ARNT2
ARNT2 isoform 2.
    
0.723
ENSPTRP00000075315
annotation not available
    
 0.693
VHL
Von Hippel-Lindau tumor suppressor.
    
 0.693
EGLN2
T0107007 isoform 1.
    
 0.663
EGLN1
EGLN1 isoform 1.
    
 0.663
ENSPTRP00000092229
annotation not available
    
 0.663
NXF3
Nuclear RNA export factor 3.
      
 0.621
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.