STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZNF579Zinc finger protein 579. (563 aa)    
Predicted Functional Partners:
RBM23
RBM23 isoform 1.
    
   0.792
LBR
Lamin B receptor.
    
   0.787
YY1AP1
YY1AP1 isoform 15.
   
  0.664
NAT14
N-acetyltransferase 14 (GCN5-related, putative).
  
  
 0.631
ISOC2
Isochorismatase domain containing 2.
    
 
 0.626
ZNF787
ZNF787 isoform 3.
  
   
 0.558
RFPL4A
RFPL4AL1 isoform 1.
   
 0.555
TM7SF2
Transmembrane 7 superfamily member 2.
    
   0.553
TNFRSF13B
TNF receptor superfamily member 13B.
    
   0.545
TMEM86B
Transmembrane protein 86B.
      
 0.544
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.