STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFR3BEFR3B isoform 2. (819 aa)    
Predicted Functional Partners:
TTC7A
Tetratricopeptide repeat domain 7A.
   
 
 0.895
TTC7B
Tetratricopeptide repeat domain 7B.
   
 
 0.853
FAM126A
Family with sequence similarity 126, member A.
      
 0.817
TMEM150A
Transmembrane protein 150A.
      
 0.707
TTC37
Tetratricopeptide repeat domain 37.
   
  
 0.695
PI4KA
PI4KA isoform 3; Belongs to the PI3/PI4-kinase family.
   
 
 0.548
ENSPTRP00000080552
annotation not available
   
 
 0.548
CK820_G0054146
PI4KA isoform 16; Belongs to the PI3/PI4-kinase family.
   
 
 0.508
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.