STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC142Coiled-coil domain containing 142. (750 aa)    
Predicted Functional Partners:
BTRC
Beta-transducin repeat containing E3 ubiquitin protein ligase.
    
 
 0.504
EIF4A1
Eukaryotic initiation factor 4A-I; ATP-dependent RNA helicase which is a subunit of the eIF4F complex involved in cap recognition and is required for mRNA binding to ribosome. In the current model of translation initiation, eIF4A unwinds RNA secondary structures in the 5'-UTR of mRNAs which is necessary to allow efficient binding of the small ribosomal subunit, and subsequent scanning for the initiator codon (By similarity).
   
 0.426
EIF4A2
Eukaryotic translation initiation factor 4A2; Belongs to the DEAD box helicase family.
   
 0.426
LOC451932
Eukaryotic initiation factor 4A-I pseudogene.
   
 0.426
ENSPTRP00000071121
annotation not available
   
 0.426
CK820_G0023433
EIF4A2 isoform 16.
   
 0.426
ENSPTRP00000072738
annotation not available
   
 0.426
ENSPTRP00000079840
annotation not available
   
 0.426
ENSPTRP00000085447
annotation not available
   
 0.426
LOC100609787
Eukaryotic initiation factor 4A-II pseudogene.
   
 0.426
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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