Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CK820_G0023028 | COL1A1 | ENSPTRP00000091588 | ENSPTRP00000015952 | COL6A2 isoform 1. | Collagen type I alpha 1 chain. | 0.844 |
CK820_G0023028 | COL1A2 | ENSPTRP00000091588 | ENSPTRP00000033204 | COL6A2 isoform 1. | Collagen type I alpha 2 chain. | 0.772 |
CK820_G0023028 | COL3A1 | ENSPTRP00000091588 | ENSPTRP00000021759 | COL6A2 isoform 1. | Collagen type III alpha 1 chain. | 0.724 |
CK820_G0023028 | COL5A2 | ENSPTRP00000091588 | ENSPTRP00000048958 | COL6A2 isoform 1. | Collagen type V alpha 2 chain. | 0.661 |
CK820_G0023028 | COL6A2 | ENSPTRP00000091588 | ENSPTRP00000024124 | COL6A2 isoform 1. | COL6A2 isoform 4. | 0.899 |
CK820_G0023028 | COL6A3 | ENSPTRP00000091588 | ENSPTRP00000022369 | COL6A2 isoform 1. | COL6A3 isoform 2. | 0.869 |
CK820_G0023028 | ITGA5 | ENSPTRP00000091588 | ENSPTRP00000008580 | COL6A2 isoform 1. | ITGA5 isoform 2; Belongs to the integrin alpha chain family. | 0.509 |
CK820_G0023028 | ITGB5 | ENSPTRP00000091588 | ENSPTRP00000051108 | COL6A2 isoform 1. | Integrin beta; Belongs to the integrin beta chain family. | 0.445 |
COL1A1 | CK820_G0023028 | ENSPTRP00000015952 | ENSPTRP00000091588 | Collagen type I alpha 1 chain. | COL6A2 isoform 1. | 0.844 |
COL1A1 | COL1A2 | ENSPTRP00000015952 | ENSPTRP00000033204 | Collagen type I alpha 1 chain. | Collagen type I alpha 2 chain. | 0.999 |
COL1A1 | COL3A1 | ENSPTRP00000015952 | ENSPTRP00000021759 | Collagen type I alpha 1 chain. | Collagen type III alpha 1 chain. | 0.997 |
COL1A1 | COL5A2 | ENSPTRP00000015952 | ENSPTRP00000048958 | Collagen type I alpha 1 chain. | Collagen type V alpha 2 chain. | 0.980 |
COL1A1 | COL6A2 | ENSPTRP00000015952 | ENSPTRP00000024124 | Collagen type I alpha 1 chain. | COL6A2 isoform 4. | 0.867 |
COL1A1 | COL6A3 | ENSPTRP00000015952 | ENSPTRP00000022369 | Collagen type I alpha 1 chain. | COL6A3 isoform 2. | 0.901 |
COL1A1 | ITGA5 | ENSPTRP00000015952 | ENSPTRP00000008580 | Collagen type I alpha 1 chain. | ITGA5 isoform 2; Belongs to the integrin alpha chain family. | 0.888 |
COL1A1 | ITGB1 | ENSPTRP00000015952 | ENSPTRP00000069754 | Collagen type I alpha 1 chain. | Integrin beta; Belongs to the integrin beta chain family. | 0.964 |
COL1A1 | ITGB5 | ENSPTRP00000015952 | ENSPTRP00000051108 | Collagen type I alpha 1 chain. | Integrin beta; Belongs to the integrin beta chain family. | 0.830 |
COL1A2 | CK820_G0023028 | ENSPTRP00000033204 | ENSPTRP00000091588 | Collagen type I alpha 2 chain. | COL6A2 isoform 1. | 0.772 |
COL1A2 | COL1A1 | ENSPTRP00000033204 | ENSPTRP00000015952 | Collagen type I alpha 2 chain. | Collagen type I alpha 1 chain. | 0.999 |
COL1A2 | COL3A1 | ENSPTRP00000033204 | ENSPTRP00000021759 | Collagen type I alpha 2 chain. | Collagen type III alpha 1 chain. | 0.999 |
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