STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFRSF13CTNF receptor superfamily member 13C. (184 aa)    
Predicted Functional Partners:
TNFSF13B
Tumor necrosis factor ligand 7A; Belongs to the tumor necrosis factor family.
    
 0.999
TRAF3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.994
TNFRSF13B
TNF receptor superfamily member 13B.
   
  
 0.867
CD40LG
CD40 ligand; Cytokine that acts as a ligand to CD40/TNFRSF5. Costimulates T-cell proliferation and cytokine production. Involved in immunoglobulin class switching.
     
 0.824
LTBR
Lymphotoxin beta receptor (TNFR superfamily, member 3).
   
 
 0.821
TRAF5
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.804
CD19
CD19 isoform 1.
   
  
 0.773
MAP3K14
Mitogen-activated protein kinase kinase kinase 14.
   
 
 0.772
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.740
TNFSF12
Tumor necrosis factor (Ligand) superfamily, member 12; Belongs to the tumor necrosis factor family.
     
 0.718
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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