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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCF20Transcription factor 20 (AR1). (1964 aa)    
Predicted Functional Partners:
SBF1
SET binding factor 1.
   
 
 0.907
CHKB
CHKB-CPT1B isoform 3.
      
 0.885
BRD1
Bromodomain containing 1.
   
 
 0.867
ZDHHC8
Probable palmitoyltransferase ZDHHC8; Putative palmitoyltransferase involved in glutamatergic transmission; Belongs to the DHHC palmitoyltransferase family. ERF2/ZDHHC9 subfamily.
      
 0.818
CELSR1
CELSR1 isoform 1; Belongs to the G-protein coupled receptor 2 family.
      
 0.765
LOC472769
Myotubularin-related protein 5 pseudogene.
   
 
 0.695
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.667
DGCR8
DiGeorge syndrome critical region gene 8.
    
 
 0.655
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
   
 0.650
DMKN
DMKN isoform 3.
    
 0.649
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.