MCAT protein (Pan troglodytes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Pan troglodytes

NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADSL	MCAT	ENSPTRP00000093087	ENSPTRP00000024925	Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.	Malonyl CoA:ACP acyltransferase (Mitochondrial).	0.793
DDX28	ERAL1	ENSPTRP00000014098	ENSPTRP00000015257	DEAD (Asp-Glu-Ala-Asp) box polypeptide 28.	Era like 12S mitochondrial rRNA chaperone 1.	0.680
DDX28	MCAT	ENSPTRP00000014098	ENSPTRP00000024925	DEAD (Asp-Glu-Ala-Asp) box polypeptide 28.	Malonyl CoA:ACP acyltransferase (Mitochondrial).	0.774
DDX28	NDUFAB1	ENSPTRP00000014098	ENSPTRP00000013471	DEAD (Asp-Glu-Ala-Asp) box polypeptide 28.	Acyl carrier protein, mitochondrial; Carrier of the growing fatty acid chain in fatty acid biosynthesis (By similarity). Accessory and non-catalytic subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), which functions in the transfer of electrons from NADH to the respiratory chain (By similarity).	0.649
DDX28	PALB2	ENSPTRP00000014098	ENSPTRP00000013473	DEAD (Asp-Glu-Ala-Asp) box polypeptide 28.	Partner and localizer of BRCA2.	0.428
ENSPTRP00000082019	ERAL1	ENSPTRP00000082019	ENSPTRP00000015257	annotation not available	Era like 12S mitochondrial rRNA chaperone 1.	0.902
ENSPTRP00000082019	MCAT	ENSPTRP00000082019	ENSPTRP00000024925	annotation not available	Malonyl CoA:ACP acyltransferase (Mitochondrial).	0.790
ENSPTRP00000082019	MRPS16	ENSPTRP00000082019	ENSPTRP00000004558	annotation not available	Mitochondrial ribosomal protein S16.	0.901
ENSPTRP00000082019	NDUFAB1	ENSPTRP00000082019	ENSPTRP00000013471	annotation not available	Acyl carrier protein, mitochondrial; Carrier of the growing fatty acid chain in fatty acid biosynthesis (By similarity). Accessory and non-catalytic subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), which functions in the transfer of electrons from NADH to the respiratory chain (By similarity).	0.534
ENSPTRP00000082019	PALB2	ENSPTRP00000082019	ENSPTRP00000013473	annotation not available	Partner and localizer of BRCA2.	0.497
ERAL1	DDX28	ENSPTRP00000015257	ENSPTRP00000014098	Era like 12S mitochondrial rRNA chaperone 1.	DEAD (Asp-Glu-Ala-Asp) box polypeptide 28.	0.680
ERAL1	ENSPTRP00000082019	ENSPTRP00000015257	ENSPTRP00000082019	Era like 12S mitochondrial rRNA chaperone 1.	annotation not available	0.902
ERAL1	MCAT	ENSPTRP00000015257	ENSPTRP00000024925	Era like 12S mitochondrial rRNA chaperone 1.	Malonyl CoA:ACP acyltransferase (Mitochondrial).	0.843
ERAL1	MRPS16	ENSPTRP00000015257	ENSPTRP00000004558	Era like 12S mitochondrial rRNA chaperone 1.	Mitochondrial ribosomal protein S16.	0.902
MCAT	ADSL	ENSPTRP00000024925	ENSPTRP00000093087	Malonyl CoA:ACP acyltransferase (Mitochondrial).	Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.	0.793
MCAT	DDX28	ENSPTRP00000024925	ENSPTRP00000014098	Malonyl CoA:ACP acyltransferase (Mitochondrial).	DEAD (Asp-Glu-Ala-Asp) box polypeptide 28.	0.774
MCAT	ENSPTRP00000082019	ENSPTRP00000024925	ENSPTRP00000082019	Malonyl CoA:ACP acyltransferase (Mitochondrial).	annotation not available	0.790
MCAT	ERAL1	ENSPTRP00000024925	ENSPTRP00000015257	Malonyl CoA:ACP acyltransferase (Mitochondrial).	Era like 12S mitochondrial rRNA chaperone 1.	0.843
MCAT	MCCC2	ENSPTRP00000024925	ENSPTRP00000029062	Malonyl CoA:ACP acyltransferase (Mitochondrial).	Methylcrotonoyl-CoA carboxylase 2 (Beta).	0.742
MCAT	MRPS16	ENSPTRP00000024925	ENSPTRP00000004558	Malonyl CoA:ACP acyltransferase (Mitochondrial).	Mitochondrial ribosomal protein S16.	0.790