KLHDC8B protein (Pan troglodytes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Pan troglodytes

NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCT3	CCT5	ENSPTRP00000051719	ENSPTRP00000028695	T-complex protein 1 subunit gamma.	Chaperonin containing TCP1, subunit 5 (Epsilon).	0.999
CCT3	CCT7	ENSPTRP00000051719	ENSPTRP00000020696	T-complex protein 1 subunit gamma.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.997
CCT3	ENSPTRP00000064921	ENSPTRP00000051719	ENSPTRP00000064921	T-complex protein 1 subunit gamma.	annotation not available	0.900
CCT3	ENSPTRP00000075146	ENSPTRP00000051719	ENSPTRP00000075146	T-complex protein 1 subunit gamma.	annotation not available	0.999
CCT3	KLHDC8B	ENSPTRP00000051719	ENSPTRP00000025748	T-complex protein 1 subunit gamma.	Kelch domain containing 8B.	0.642
CCT3	PEX7	ENSPTRP00000051719	ENSPTRP00000031819	T-complex protein 1 subunit gamma.	Peroxisomal biogenesis factor 7.	0.522
CCT5	CCT3	ENSPTRP00000028695	ENSPTRP00000051719	Chaperonin containing TCP1, subunit 5 (Epsilon).	T-complex protein 1 subunit gamma.	0.999
CCT5	CCT7	ENSPTRP00000028695	ENSPTRP00000020696	Chaperonin containing TCP1, subunit 5 (Epsilon).	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.999
CCT5	ENSPTRP00000064921	ENSPTRP00000028695	ENSPTRP00000064921	Chaperonin containing TCP1, subunit 5 (Epsilon).	annotation not available	0.999
CCT5	ENSPTRP00000075146	ENSPTRP00000028695	ENSPTRP00000075146	Chaperonin containing TCP1, subunit 5 (Epsilon).	annotation not available	0.901
CCT5	KLHDC8B	ENSPTRP00000028695	ENSPTRP00000025748	Chaperonin containing TCP1, subunit 5 (Epsilon).	Kelch domain containing 8B.	0.783
CCT5	PEX7	ENSPTRP00000028695	ENSPTRP00000031819	Chaperonin containing TCP1, subunit 5 (Epsilon).	Peroxisomal biogenesis factor 7.	0.692
CCT7	CCT3	ENSPTRP00000020696	ENSPTRP00000051719	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	T-complex protein 1 subunit gamma.	0.997
CCT7	CCT5	ENSPTRP00000020696	ENSPTRP00000028695	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Chaperonin containing TCP1, subunit 5 (Epsilon).	0.999
CCT7	ENSPTRP00000064921	ENSPTRP00000020696	ENSPTRP00000064921	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	annotation not available	0.997
CCT7	ENSPTRP00000075146	ENSPTRP00000020696	ENSPTRP00000075146	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	annotation not available	0.997
CCT7	KLHDC8B	ENSPTRP00000020696	ENSPTRP00000025748	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Kelch domain containing 8B.	0.698
CCT7	PEX7	ENSPTRP00000020696	ENSPTRP00000031819	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Peroxisomal biogenesis factor 7.	0.521
ENSPTRP00000064921	CCT3	ENSPTRP00000064921	ENSPTRP00000051719	annotation not available	T-complex protein 1 subunit gamma.	0.900
ENSPTRP00000064921	CCT5	ENSPTRP00000064921	ENSPTRP00000028695	annotation not available	Chaperonin containing TCP1, subunit 5 (Epsilon).	0.999