| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| GATA2 | POU1F1 | ENSPTRP00000054198 | ENSPTRP00000026108 | GATA binding protein 2. | POU domain protein. | 0.687 |
| HESX1 | LHX3 | ENSPTRP00000025986 | ENSPTRP00000063429 | Homeobox expressed in ES cells 1; Required for the normal development of the forebrain, eyes and other anterior structures such as the olfactory placodes and pituitary gland. Possible transcriptional repressor. Binds to the palindromic PIII sequence, 5'-AGCTTGAGTCTAATTGAATTAACTGTAC-3'. HESX1 and PROP1 bind as heterodimers on this palindromic site, and, in vitro, HESX1 can antagonize PROP1 activation (By similarity). | LHX3 isoform 2. | 0.657 |
| HESX1 | LHX4 | ENSPTRP00000025986 | ENSPTRP00000002905 | Homeobox expressed in ES cells 1; Required for the normal development of the forebrain, eyes and other anterior structures such as the olfactory placodes and pituitary gland. Possible transcriptional repressor. Binds to the palindromic PIII sequence, 5'-AGCTTGAGTCTAATTGAATTAACTGTAC-3'. HESX1 and PROP1 bind as heterodimers on this palindromic site, and, in vitro, HESX1 can antagonize PROP1 activation (By similarity). | LHX4 isoform 1. | 0.489 |
| HESX1 | POU1F1 | ENSPTRP00000025986 | ENSPTRP00000026108 | Homeobox expressed in ES cells 1; Required for the normal development of the forebrain, eyes and other anterior structures such as the olfactory placodes and pituitary gland. Possible transcriptional repressor. Binds to the palindromic PIII sequence, 5'-AGCTTGAGTCTAATTGAATTAACTGTAC-3'. HESX1 and PROP1 bind as heterodimers on this palindromic site, and, in vitro, HESX1 can antagonize PROP1 activation (By similarity). | POU domain protein. | 0.789 |
| LHX3 | HESX1 | ENSPTRP00000063429 | ENSPTRP00000025986 | LHX3 isoform 2. | Homeobox expressed in ES cells 1; Required for the normal development of the forebrain, eyes and other anterior structures such as the olfactory placodes and pituitary gland. Possible transcriptional repressor. Binds to the palindromic PIII sequence, 5'-AGCTTGAGTCTAATTGAATTAACTGTAC-3'. HESX1 and PROP1 bind as heterodimers on this palindromic site, and, in vitro, HESX1 can antagonize PROP1 activation (By similarity). | 0.657 |
| LHX3 | LHX4 | ENSPTRP00000063429 | ENSPTRP00000002905 | LHX3 isoform 2. | LHX4 isoform 1. | 0.696 |
| LHX3 | PAX4 | ENSPTRP00000063429 | ENSPTRP00000033650 | LHX3 isoform 2. | PAX4 isoform 1. | 0.439 |
| LHX3 | POU1F1 | ENSPTRP00000063429 | ENSPTRP00000026108 | LHX3 isoform 2. | POU domain protein. | 0.772 |
| LHX3 | POU6F1 | ENSPTRP00000063429 | ENSPTRP00000008452 | LHX3 isoform 2. | POU domain protein. | 0.432 |
| LHX3 | PRL | ENSPTRP00000063429 | ENSPTRP00000030340 | LHX3 isoform 2. | PRL isoform 1. | 0.582 |
| LHX3 | PROP1 | ENSPTRP00000063429 | ENSPTRP00000030054 | LHX3 isoform 2. | PROP paired-like homeobox 1. | 0.684 |
| LHX3 | TSHB | ENSPTRP00000063429 | ENSPTRP00000001962 | LHX3 isoform 2. | Thyroid stimulating hormone subunit beta. | 0.520 |
| LHX4 | HESX1 | ENSPTRP00000002905 | ENSPTRP00000025986 | LHX4 isoform 1. | Homeobox expressed in ES cells 1; Required for the normal development of the forebrain, eyes and other anterior structures such as the olfactory placodes and pituitary gland. Possible transcriptional repressor. Binds to the palindromic PIII sequence, 5'-AGCTTGAGTCTAATTGAATTAACTGTAC-3'. HESX1 and PROP1 bind as heterodimers on this palindromic site, and, in vitro, HESX1 can antagonize PROP1 activation (By similarity). | 0.489 |
| LHX4 | LHX3 | ENSPTRP00000002905 | ENSPTRP00000063429 | LHX4 isoform 1. | LHX3 isoform 2. | 0.696 |
| LHX4 | PAX4 | ENSPTRP00000002905 | ENSPTRP00000033650 | LHX4 isoform 1. | PAX4 isoform 1. | 0.463 |
| LHX4 | POU1F1 | ENSPTRP00000002905 | ENSPTRP00000026108 | LHX4 isoform 1. | POU domain protein. | 0.804 |
| LHX4 | PRL | ENSPTRP00000002905 | ENSPTRP00000030340 | LHX4 isoform 1. | PRL isoform 1. | 0.586 |
| LHX4 | PROP1 | ENSPTRP00000002905 | ENSPTRP00000030054 | LHX4 isoform 1. | PROP paired-like homeobox 1. | 0.584 |
| NR3C1 | POU1F1 | ENSPTRP00000029679 | ENSPTRP00000026108 | NR3C1 isoform 5. | POU domain protein. | 0.691 |
| PAX4 | LHX3 | ENSPTRP00000033650 | ENSPTRP00000063429 | PAX4 isoform 1. | LHX3 isoform 2. | 0.439 |
