STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IQCB1IQ motif containing B1. (598 aa)    
Predicted Functional Partners:
CEP290
CEP290 isoform 5.
    
 
 0.976
CALML5
Calmodulin like 5.
    
 0.873
CALML6
Calmodulin like 6.
    
 0.870
CALML3
Calmodulin like 3; Belongs to the calmodulin family.
    
 0.866
CALM3
Calmodulin 1 (Phosphorylase kinase, delta); Belongs to the calmodulin family.
    
 0.865
SDCCAG8
Serologically defined colon cancer antigen 8.
    
 
 0.842
NPAT
Nuclear protein, coactivator of histone transcription.
   
 
 0.761
NPHP1
NPHP1 isoform 1.
    
 0.747
CALML4
Calmodulin like 4.
    
 0.740
NPHP4
NPHP4 isoform 5.
    
 
 0.726
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.