| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ANKS6 | INVS | ENSPTRP00000049152 | ENSPTRP00000036212 | ANKS6 isoform 2. | INVS isoform 1. | 0.513 |
| ANKS6 | NPHP1 | ENSPTRP00000049152 | ENSPTRP00000073735 | ANKS6 isoform 2. | NPHP1 isoform 1. | 0.632 |
| ANKS6 | NPHP3 | ENSPTRP00000049152 | ENSPTRP00000026546 | ANKS6 isoform 2. | NPHP3 isoform 6. | 0.928 |
| ARL3 | CABP1 | ENSPTRP00000082289 | ENSPTRP00000070762 | ADP-ribosylation factor-like 3; Belongs to the small GTPase superfamily. Arf family. | Calcium binding protein 1. | 0.696 |
| ARL3 | CABP2 | ENSPTRP00000082289 | ENSPTRP00000065948 | ADP-ribosylation factor-like 3; Belongs to the small GTPase superfamily. Arf family. | Calcium binding protein 2. | 0.696 |
| ARL3 | INVS | ENSPTRP00000082289 | ENSPTRP00000036212 | ADP-ribosylation factor-like 3; Belongs to the small GTPase superfamily. Arf family. | INVS isoform 1. | 0.636 |
| ARL3 | NPHP1 | ENSPTRP00000082289 | ENSPTRP00000073735 | ADP-ribosylation factor-like 3; Belongs to the small GTPase superfamily. Arf family. | NPHP1 isoform 1. | 0.510 |
| ARL3 | NPHP3 | ENSPTRP00000082289 | ENSPTRP00000026546 | ADP-ribosylation factor-like 3; Belongs to the small GTPase superfamily. Arf family. | NPHP3 isoform 6. | 0.788 |
| ARL3 | UNC119 | ENSPTRP00000082289 | ENSPTRP00000015226 | ADP-ribosylation factor-like 3; Belongs to the small GTPase superfamily. Arf family. | Unc-119 lipid binding chaperone. | 0.970 |
| ARL3 | UNC119B | ENSPTRP00000082289 | ENSPTRP00000009409 | ADP-ribosylation factor-like 3; Belongs to the small GTPase superfamily. Arf family. | Unc-119 lipid binding chaperone B. | 0.922 |
| CABP1 | ARL3 | ENSPTRP00000070762 | ENSPTRP00000082289 | Calcium binding protein 1. | ADP-ribosylation factor-like 3; Belongs to the small GTPase superfamily. Arf family. | 0.696 |
| CABP1 | NPHP3 | ENSPTRP00000070762 | ENSPTRP00000026546 | Calcium binding protein 1. | NPHP3 isoform 6. | 0.788 |
| CABP1 | UNC119 | ENSPTRP00000070762 | ENSPTRP00000015226 | Calcium binding protein 1. | Unc-119 lipid binding chaperone. | 0.564 |
| CABP2 | ARL3 | ENSPTRP00000065948 | ENSPTRP00000082289 | Calcium binding protein 2. | ADP-ribosylation factor-like 3; Belongs to the small GTPase superfamily. Arf family. | 0.696 |
| CABP2 | NPHP3 | ENSPTRP00000065948 | ENSPTRP00000026546 | Calcium binding protein 2. | NPHP3 isoform 6. | 0.788 |
| CABP2 | UNC119 | ENSPTRP00000065948 | ENSPTRP00000015226 | Calcium binding protein 2. | Unc-119 lipid binding chaperone. | 0.557 |
| GTPBP2 | NPHP3 | ENSPTRP00000074161 | ENSPTRP00000026546 | GTP binding protein 2. | NPHP3 isoform 6. | 0.695 |
| INVS | ANKS6 | ENSPTRP00000036212 | ENSPTRP00000049152 | INVS isoform 1. | ANKS6 isoform 2. | 0.513 |
| INVS | ARL3 | ENSPTRP00000036212 | ENSPTRP00000082289 | INVS isoform 1. | ADP-ribosylation factor-like 3; Belongs to the small GTPase superfamily. Arf family. | 0.636 |
| INVS | NPHP1 | ENSPTRP00000036212 | ENSPTRP00000073735 | INVS isoform 1. | NPHP1 isoform 1. | 0.844 |
