STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGCBSarcoglycan beta. (320 aa)    
Predicted Functional Partners:
SGCA
Sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein).
   
 
 0.955
SGCD
Sarcoglycan, delta (35kDa dystrophin-associated glycoprotein).
   
0.916
SGCG
Sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein).
   
0.872
SGCE
SGCE isoform 9.
   
 
 0.854
DAG1
Dystroglycan 1 (Dystrophin-associated glycoprotein 1).
     
 0.843
SGCZ
Sarcoglycan zeta.
   
0.821
SNTB1
Syntrophin, beta 1 (Dystrophin-associated protein A1, 59kDa, basic component 1).
     
 0.798
UTRN
UTRN isoform 1.
     
 0.771
SSPN
Sarcospan (Kras oncogene-associated gene).
     
 0.727
FKRP
FKRP isoform 10.
      
 0.673
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.