PDCL2 protein (Pan troglodytes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Pan troglodytes

NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee

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SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCT2	CCT7	ENSPTRP00000076372	ENSPTRP00000020696	Chaperonin containing TCP1, subunit 2 (Beta).	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.999
CCT2	PDCL2	ENSPTRP00000076372	ENSPTRP00000027644	Chaperonin containing TCP1, subunit 2 (Beta).	Phosducin like 2.	0.637
CCT2	RPS13	ENSPTRP00000076372	ENSPTRP00000072581	Chaperonin containing TCP1, subunit 2 (Beta).	Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	0.441
CCT7	CCT2	ENSPTRP00000020696	ENSPTRP00000076372	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Chaperonin containing TCP1, subunit 2 (Beta).	0.999
CCT7	ENSPTRP00000071028	ENSPTRP00000020696	ENSPTRP00000071028	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	annotation not available	0.446
CCT7	LOC462608	ENSPTRP00000020696	ENSPTRP00000059777	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Ribosomal protein S18 pseudogene.	0.446
CCT7	PDCL2	ENSPTRP00000020696	ENSPTRP00000027644	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Phosducin like 2.	0.597
CCT7	RPS13	ENSPTRP00000020696	ENSPTRP00000072581	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	0.532
ENSPTRP00000071028	CCT7	ENSPTRP00000071028	ENSPTRP00000020696	annotation not available	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.446
ENSPTRP00000071028	PDCL2	ENSPTRP00000071028	ENSPTRP00000027644	annotation not available	Phosducin like 2.	0.557
ENSPTRP00000071028	RPS13	ENSPTRP00000071028	ENSPTRP00000072581	annotation not available	Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	0.963
EXOC1L	LNX1	ENSPTRP00000070748	ENSPTRP00000027630	Exocyst complex component 1 like.	Ligand of numb-protein X 1.	0.597
EXOC1L	PDCL2	ENSPTRP00000070748	ENSPTRP00000027644	Exocyst complex component 1 like.	Phosducin like 2.	0.616
LNX1	EXOC1L	ENSPTRP00000027630	ENSPTRP00000070748	Ligand of numb-protein X 1.	Exocyst complex component 1 like.	0.597
LNX1	PDCL2	ENSPTRP00000027630	ENSPTRP00000027644	Ligand of numb-protein X 1.	Phosducin like 2.	0.582
LOC462608	CCT7	ENSPTRP00000059777	ENSPTRP00000020696	Ribosomal protein S18 pseudogene.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.446
LOC462608	PDCL2	ENSPTRP00000059777	ENSPTRP00000027644	Ribosomal protein S18 pseudogene.	Phosducin like 2.	0.557
LOC462608	RPS13	ENSPTRP00000059777	ENSPTRP00000072581	Ribosomal protein S18 pseudogene.	Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	0.963
PDCL2	CCT2	ENSPTRP00000027644	ENSPTRP00000076372	Phosducin like 2.	Chaperonin containing TCP1, subunit 2 (Beta).	0.637
PDCL2	CCT7	ENSPTRP00000027644	ENSPTRP00000020696	Phosducin like 2.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.597