PRDM5 protein (Pan troglodytes) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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[Homology]

Score

PRDM5

Zinc finger protein. (630 aa)

Predicted Functional Partners:

UROS

0.847

KNG1

0.838

EDIL3

0.818

PCOLCE2

0.788

HAPLN1

0.683

BTN1A1

0.663

GPC6

0.647

GTF3C1

0.535

COL11A1

0.535

SH3RF3

0.507

Your Current Organism:

Pan troglodytes

NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BTN1A1	PRDM5	ENSPTRP00000030425	ENSPTRP00000087376	Butyrophilin subfamily 1 member A1.	Zinc finger protein.	0.663
COL11A1	EDIL3	ENSPTRP00000088916	ENSPTRP00000085706	Collagen type XI alpha 1 chain.	EGF-like repeats and discoidin I-like domains 3.	0.725
COL11A1	HAPLN1	ENSPTRP00000088916	ENSPTRP00000029198	Collagen type XI alpha 1 chain.	Hyaluronan and proteoglycan link protein 1.	0.700
COL11A1	PRDM5	ENSPTRP00000088916	ENSPTRP00000087376	Collagen type XI alpha 1 chain.	Zinc finger protein.	0.535
EDIL3	COL11A1	ENSPTRP00000085706	ENSPTRP00000088916	EGF-like repeats and discoidin I-like domains 3.	Collagen type XI alpha 1 chain.	0.725
EDIL3	GPC6	ENSPTRP00000085706	ENSPTRP00000010132	EGF-like repeats and discoidin I-like domains 3.	GPC6 isoform 1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.460
EDIL3	HAPLN1	ENSPTRP00000085706	ENSPTRP00000029198	EGF-like repeats and discoidin I-like domains 3.	Hyaluronan and proteoglycan link protein 1.	0.802
EDIL3	PCOLCE2	ENSPTRP00000085706	ENSPTRP00000092168	EGF-like repeats and discoidin I-like domains 3.	Procollagen C-endopeptidase enhancer 2.	0.638
EDIL3	PRDM5	ENSPTRP00000085706	ENSPTRP00000087376	EGF-like repeats and discoidin I-like domains 3.	Zinc finger protein.	0.818
GPC6	EDIL3	ENSPTRP00000010132	ENSPTRP00000085706	GPC6 isoform 1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	EGF-like repeats and discoidin I-like domains 3.	0.460
GPC6	PCOLCE2	ENSPTRP00000010132	ENSPTRP00000092168	GPC6 isoform 1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	Procollagen C-endopeptidase enhancer 2.	0.705
GPC6	PRDM5	ENSPTRP00000010132	ENSPTRP00000087376	GPC6 isoform 1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	Zinc finger protein.	0.647
GTF3C1	PRDM5	ENSPTRP00000040679	ENSPTRP00000087376	General transcription factor IIIC, polypeptide 1, alpha 220kDa.	Zinc finger protein.	0.535
HAPLN1	COL11A1	ENSPTRP00000029198	ENSPTRP00000088916	Hyaluronan and proteoglycan link protein 1.	Collagen type XI alpha 1 chain.	0.700
HAPLN1	EDIL3	ENSPTRP00000029198	ENSPTRP00000085706	Hyaluronan and proteoglycan link protein 1.	EGF-like repeats and discoidin I-like domains 3.	0.802
HAPLN1	PRDM5	ENSPTRP00000029198	ENSPTRP00000087376	Hyaluronan and proteoglycan link protein 1.	Zinc finger protein.	0.683
KNG1	PRDM5	ENSPTRP00000065338	ENSPTRP00000087376	KNG1 isoform 2.	Zinc finger protein.	0.838
KNG1	UROS	ENSPTRP00000065338	ENSPTRP00000005362	KNG1 isoform 2.	Uroporphyrinogen III synthase.	0.884
PCOLCE2	EDIL3	ENSPTRP00000092168	ENSPTRP00000085706	Procollagen C-endopeptidase enhancer 2.	EGF-like repeats and discoidin I-like domains 3.	0.638
PCOLCE2	GPC6	ENSPTRP00000092168	ENSPTRP00000010132	Procollagen C-endopeptidase enhancer 2.	GPC6 isoform 1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.	0.705