BBS12 protein (Pan troglodytes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Pan troglodytes

NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BBS1	BBS10	ENSPTRP00000006768	ENSPTRP00000008903	Bardet-Biedl syndrome 1 protein isoform X1.	Bardet-Biedl syndrome 10.	0.856
BBS1	BBS12	ENSPTRP00000006768	ENSPTRP00000028195	Bardet-Biedl syndrome 1 protein isoform X1.	BBS12 isoform 1.	0.780
BBS1	BBS2	ENSPTRP00000006768	ENSPTRP00000013880	Bardet-Biedl syndrome 1 protein isoform X1.	Bardet-Biedl syndrome 2 protein homolog.	0.998
BBS1	BBS4	ENSPTRP00000006768	ENSPTRP00000057396	Bardet-Biedl syndrome 1 protein isoform X1.	Bardet-Biedl syndrome 4.	0.997
BBS1	BBS5	ENSPTRP00000006768	ENSPTRP00000021547	Bardet-Biedl syndrome 1 protein isoform X1.	T0004560 isoform 1.	0.997
BBS1	BBS7	ENSPTRP00000006768	ENSPTRP00000028183	Bardet-Biedl syndrome 1 protein isoform X1.	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	0.996
BBS1	BBS9	ENSPTRP00000006768	ENSPTRP00000084776	Bardet-Biedl syndrome 1 protein isoform X1.	Bardet-Biedl syndrome 9.	0.996
BBS1	MKKS	ENSPTRP00000006768	ENSPTRP00000022725	Bardet-Biedl syndrome 1 protein isoform X1.	McKusick-Kaufman syndrome.	0.613
BBS10	BBS1	ENSPTRP00000008903	ENSPTRP00000006768	Bardet-Biedl syndrome 10.	Bardet-Biedl syndrome 1 protein isoform X1.	0.856
BBS10	BBS12	ENSPTRP00000008903	ENSPTRP00000028195	Bardet-Biedl syndrome 10.	BBS12 isoform 1.	0.969
BBS10	BBS2	ENSPTRP00000008903	ENSPTRP00000013880	Bardet-Biedl syndrome 10.	Bardet-Biedl syndrome 2 protein homolog.	0.912
BBS10	BBS4	ENSPTRP00000008903	ENSPTRP00000057396	Bardet-Biedl syndrome 10.	Bardet-Biedl syndrome 4.	0.826
BBS10	BBS5	ENSPTRP00000008903	ENSPTRP00000021547	Bardet-Biedl syndrome 10.	T0004560 isoform 1.	0.843
BBS10	BBS7	ENSPTRP00000008903	ENSPTRP00000028183	Bardet-Biedl syndrome 10.	Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.	0.896
BBS10	BBS9	ENSPTRP00000008903	ENSPTRP00000084776	Bardet-Biedl syndrome 10.	Bardet-Biedl syndrome 9.	0.799
BBS10	CCT2	ENSPTRP00000008903	ENSPTRP00000076372	Bardet-Biedl syndrome 10.	Chaperonin containing TCP1, subunit 2 (Beta).	0.992
BBS10	MKKS	ENSPTRP00000008903	ENSPTRP00000022725	Bardet-Biedl syndrome 10.	McKusick-Kaufman syndrome.	0.968
BBS10	TCP1	ENSPTRP00000008903	ENSPTRP00000032017	Bardet-Biedl syndrome 10.	T-complex protein 1 subunit alpha.	0.648
BBS12	BBS1	ENSPTRP00000028195	ENSPTRP00000006768	BBS12 isoform 1.	Bardet-Biedl syndrome 1 protein isoform X1.	0.780
BBS12	BBS10	ENSPTRP00000028195	ENSPTRP00000008903	BBS12 isoform 1.	Bardet-Biedl syndrome 10.	0.969