STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMARCA5SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5. (1052 aa)    
Predicted Functional Partners:
BAZ1B
Bromodomain adjacent to zinc finger domain, 1B.
   
 0.999
RSF1
Remodeling and spacing factor 1.
   
 0.996
BAZ1A
Bromodomain adjacent to zinc finger domain 1A.
    
 0.996
BAZ2A
BAZ2A isoform 2.
    
 0.994
POLE3
Polymerase (DNA directed), epsilon 3 (P17 subunit).
    
 0.985
CHRAC1
Chromatin accessibility complex subunit 1.
    
 0.983
MYBBP1A
MYB binding protein (P160) 1a.
   
 0.956
DDX21
DEAD (Asp-Glu-Ala-Asp) box polypeptide 21.
   
 0.949
CECR2
CECR2 isoform 2.
   
 0.947
DEK
DEK proto-oncogene.
   
 0.946
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.