STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TLL1Metalloendopeptidase. (1036 aa)    
Predicted Functional Partners:
CHRD
Chordin; Dorsalizing factor. Key developmental protein that dorsalizes early vertebrate embryonic tissues by binding to ventralizing TGF-beta family bone morphogenetic proteins (BMPs) and sequestering them in latent complexes.
   
 
 0.832
COL21A1
COL21A1 isoform 2.
    
 0.571
COL4A6
Collagen type IV alpha 6 chain.
    
 0.571
TBX20
T-box transcription factor 20.
    
 
 0.550
COL27A1
COL27A1 isoform 1.
   
 0.544
DEPDC5
DEP domain containing 5.
   
  
 0.534
COL19A1
COL19A1 isoform 1.
    
 0.533
COL20A1
Collagen type XX alpha 1 chain.
    
 0.510
PCOLCE
Procollagen C-endopeptidase enhancer.
   
0.492
PCOLCE-2
Procollagen C-endopeptidase enhancer.
   
0.492
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.