STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CERT1Ceramide transporter 1. (752 aa)    
Predicted Functional Partners:
CSNK1G2
Casein kinase 1, gamma 2; Belongs to the protein kinase superfamily.
    
 0.908
VAPA
VAPA isoform 3.
    
 0.848
VAPB
VAMP (Vesicle-associated membrane protein)-associated protein B and C.
    
 0.753
COL4A3
Collagen type IV alpha 3 chain.
      
 0.659
CSNK1G3
Casein kinase 1, gamma 3; Belongs to the protein kinase superfamily.
    
 0.643
APCS
Pentaxin.
    
 
 0.642
CSNK1G1
Casein kinase 1 gamma 1; Belongs to the protein kinase superfamily.
    
 0.631
COL18A1
Collagen type XVIII alpha 1 chain.
      
 0.618
PPP2R5D
Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.
   
 
 0.607
PCTP
Phosphatidylcholine transfer protein.
      
 0.575
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.