STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HARS1HARS isoform 1. (509 aa)    
Predicted Functional Partners:
HARS2
Histidyl-tRNA synthetase 2, mitochondrial (Putative).
  
 
0.998
YARS1
YARS isoform 2.
  
 
 0.934
EPRS1
EPRS isoform 1.
  
 
 0.826
MARS1
MARS isoform 7.
  
 
 0.802
PSMD14
Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 14.
   
 
 0.786
EIF2S1
Eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa.
   
 0.765
GPC4
GPC4 isoform 1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
    
 
 0.753
GARS1
GARS isoform 2.
  
 
 0.734
KARS1
KARS isoform 4.
  
 
 0.734
VARS1
VARS isoform 2.
  
 
 0.732
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.