PATR-H protein (Pan troglodytes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Pan troglodytes

NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B2M	CD8A	ENSPTRP00000011997	ENSPTRP00000067343	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system (By similarity).	CD8A isoform 1.	0.856
B2M	ENSPTRP00000082911	ENSPTRP00000011997	ENSPTRP00000082911	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system (By similarity).	annotation not available	0.804
B2M	KLRD1	ENSPTRP00000011997	ENSPTRP00000057110	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system (By similarity).	Natural killer cells antigen CD94; Plays a role as a receptor for the recognition of MHC class I HLA-E molecules by NK cells and some cytotoxic T-cells.	0.767
B2M	PATR-B	ENSPTRP00000011997	ENSPTRP00000065181	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system (By similarity).	Patr class I histocompatibility antigen, C alpha chain; Involved in the presentation of foreign antigens to the immune system.	0.965
B2M	PATR-G	ENSPTRP00000011997	ENSPTRP00000056399	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system (By similarity).	Patr class I histocompatibility antigen, alpha chain G; Involved in the presentation of foreign antigens to the immune system.	0.969
B2M	PATR-H	ENSPTRP00000011997	ENSPTRP00000030551	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system (By similarity).	Major histocompatibility complex, class I, H (pseudogene).	0.853
B2M	TAP1	ENSPTRP00000011997	ENSPTRP00000044308	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system (By similarity).	TAP1 isoform 1.	0.787
B2M	TAPBP	ENSPTRP00000011997	ENSPTRP00000030816	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system (By similarity).	TAP binding protein.	0.867
CD8A	B2M	ENSPTRP00000067343	ENSPTRP00000011997	CD8A isoform 1.	Beta-2-microglobulin; Component of the class I major histocompatibility complex (MHC). Involved in the presentation of peptide antigens to the immune system (By similarity).	0.856
CD8A	ENSPTRP00000066250	ENSPTRP00000067343	ENSPTRP00000066250	CD8A isoform 1.	annotation not available	0.829
CD8A	ENSPTRP00000082911	ENSPTRP00000067343	ENSPTRP00000082911	CD8A isoform 1.	annotation not available	0.533
CD8A	KLRD1	ENSPTRP00000067343	ENSPTRP00000057110	CD8A isoform 1.	Natural killer cells antigen CD94; Plays a role as a receptor for the recognition of MHC class I HLA-E molecules by NK cells and some cytotoxic T-cells.	0.846
CD8A	PATR-B	ENSPTRP00000067343	ENSPTRP00000065181	CD8A isoform 1.	Patr class I histocompatibility antigen, C alpha chain; Involved in the presentation of foreign antigens to the immune system.	0.493
CD8A	PATR-G	ENSPTRP00000067343	ENSPTRP00000056399	CD8A isoform 1.	Patr class I histocompatibility antigen, alpha chain G; Involved in the presentation of foreign antigens to the immune system.	0.767
CD8A	PATR-H	ENSPTRP00000067343	ENSPTRP00000030551	CD8A isoform 1.	Major histocompatibility complex, class I, H (pseudogene).	0.699
CD8A	RPA2	ENSPTRP00000067343	ENSPTRP00000067055	CD8A isoform 1.	Replication protein A2, 32kDa.	0.829
ENSPTRP00000066250	CD8A	ENSPTRP00000066250	ENSPTRP00000067343	annotation not available	CD8A isoform 1.	0.829
ENSPTRP00000066250	ENSPTRP00000082911	ENSPTRP00000066250	ENSPTRP00000082911	annotation not available	annotation not available	0.708
ENSPTRP00000066250	KLRD1	ENSPTRP00000066250	ENSPTRP00000057110	annotation not available	Natural killer cells antigen CD94; Plays a role as a receptor for the recognition of MHC class I HLA-E molecules by NK cells and some cytotoxic T-cells.	0.679
ENSPTRP00000066250	PATR-B	ENSPTRP00000066250	ENSPTRP00000065181	annotation not available	Patr class I histocompatibility antigen, C alpha chain; Involved in the presentation of foreign antigens to the immune system.	0.528