NMBR protein (Pan troglodytes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Pan troglodytes

NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BRS3	GNB1	ENSPTRP00000038443	ENSPTRP00000067330	Bombesin receptor subtype 3; Belongs to the G-protein coupled receptor 1 family.	Guanine nucleotide binding protein (G protein), beta polypeptide 1.	0.723
BRS3	GNG2	ENSPTRP00000038443	ENSPTRP00000065345	Bombesin receptor subtype 3; Belongs to the G-protein coupled receptor 1 family.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.583
BRS3	GRP	ENSPTRP00000038443	ENSPTRP00000017089	Bombesin receptor subtype 3; Belongs to the G-protein coupled receptor 1 family.	Gastrin releasing peptide.	0.988
BRS3	GRPR	ENSPTRP00000038443	ENSPTRP00000037174	Bombesin receptor subtype 3; Belongs to the G-protein coupled receptor 1 family.	Gastrin releasing peptide receptor; Belongs to the G-protein coupled receptor 1 family.	0.941
BRS3	NMB	ENSPTRP00000038443	ENSPTRP00000012650	Bombesin receptor subtype 3; Belongs to the G-protein coupled receptor 1 family.	NMB isoform 1.	0.975
BRS3	NMBR	ENSPTRP00000038443	ENSPTRP00000031848	Bombesin receptor subtype 3; Belongs to the G-protein coupled receptor 1 family.	Neuromedin B receptor; Belongs to the G-protein coupled receptor 1 family.	0.927
BRS3	NTS	ENSPTRP00000038443	ENSPTRP00000008965	Bombesin receptor subtype 3; Belongs to the G-protein coupled receptor 1 family.	NTS isoform 1.	0.603
BRS3	SEC11A	ENSPTRP00000038443	ENSPTRP00000083544	Bombesin receptor subtype 3; Belongs to the G-protein coupled receptor 1 family.	Signal peptidase complex catalytic subunit SEC11.	0.733
BRS3	SEC11C	ENSPTRP00000038443	ENSPTRP00000085560	Bombesin receptor subtype 3; Belongs to the G-protein coupled receptor 1 family.	Signal peptidase complex catalytic subunit SEC11.	0.731
GNB1	BRS3	ENSPTRP00000067330	ENSPTRP00000038443	Guanine nucleotide binding protein (G protein), beta polypeptide 1.	Bombesin receptor subtype 3; Belongs to the G-protein coupled receptor 1 family.	0.723
GNB1	GNG2	ENSPTRP00000067330	ENSPTRP00000065345	Guanine nucleotide binding protein (G protein), beta polypeptide 1.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.999
GNB1	GRP	ENSPTRP00000067330	ENSPTRP00000017089	Guanine nucleotide binding protein (G protein), beta polypeptide 1.	Gastrin releasing peptide.	0.562
GNB1	GRPR	ENSPTRP00000067330	ENSPTRP00000037174	Guanine nucleotide binding protein (G protein), beta polypeptide 1.	Gastrin releasing peptide receptor; Belongs to the G-protein coupled receptor 1 family.	0.588
GNB1	NMBR	ENSPTRP00000067330	ENSPTRP00000031848	Guanine nucleotide binding protein (G protein), beta polypeptide 1.	Neuromedin B receptor; Belongs to the G-protein coupled receptor 1 family.	0.588
GNG2	BRS3	ENSPTRP00000065345	ENSPTRP00000038443	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Bombesin receptor subtype 3; Belongs to the G-protein coupled receptor 1 family.	0.583
GNG2	GNB1	ENSPTRP00000065345	ENSPTRP00000067330	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Guanine nucleotide binding protein (G protein), beta polypeptide 1.	0.999
GNG2	GRP	ENSPTRP00000065345	ENSPTRP00000017089	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Gastrin releasing peptide.	0.568
GNG2	GRPR	ENSPTRP00000065345	ENSPTRP00000037174	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Gastrin releasing peptide receptor; Belongs to the G-protein coupled receptor 1 family.	0.583
GNG2	NMBR	ENSPTRP00000065345	ENSPTRP00000031848	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	Neuromedin B receptor; Belongs to the G-protein coupled receptor 1 family.	0.583
GRP	BRS3	ENSPTRP00000017089	ENSPTRP00000038443	Gastrin releasing peptide.	Bombesin receptor subtype 3; Belongs to the G-protein coupled receptor 1 family.	0.988