Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSPH3Radial spoke 3 homolog. (560 aa)    
Predicted Functional Partners:
RSPH4A
Radial spoke head component 4A.
  
 
 0.975
RSPH9
Uncharacterized protein.
   
 
 0.971
RSPH1
Radial spoke head 1 homolog.
   
 
 0.955
EFHC1
EF-hand domain containing 1.
  
 
 0.932
RSPH6A
Radial spoke head 6 homolog A.
  
 
 0.923
DNALI1
Dynein axonemal light intermediate chain 1.
  
 
 0.911
DNAI1
Dynein axonemal intermediate chain 1.
  
 
 0.898
CFAP20
Cilia and flagella associated protein 20.
    
 
 0.887
CFAP52
Cilia and flagella associated protein 52.
   
 
 0.886
DNAH3
Dynein axonemal heavy chain 3.
   
 
 0.881
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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