STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BUD23BUD23 rRNA methyltransferase and ribosome maturation factor. (298 aa)    
Predicted Functional Partners:
TRMT112
tRNA methyltransferase subunit 11-2.
   
 0.987
ENSPTRP00000060220
annotation not available
   
 0.987
LTV1
Protein LTV1 homolog.
   
 0.962
BYSL
BYSL isoform 1.
   
 0.946
DIMT1
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
   
 
 0.941
NOB1
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
   
 0.940
TSR1
TSR1, 20S rRNA accumulation, homolog.
   
 0.937
UTP14A
UTP14A small subunit processome component.
   
 
 0.885
PNO1
Partner of NOB1 homolog.
   
 0.882
RRP12
Ribosomal RNA processing 12 homolog.
   
 
 0.877
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.