STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUX1Homeobox protein cut-like. (1515 aa)    
Predicted Functional Partners:
TBR1
T-box brain transcription factor 1.
    
 
 0.706
GOLGA5
GOLGA5 isoform 1.
     
 0.676
BCL11B
BAF chromatin remodeling complex subunit BCL11B.
    
 
 0.671
SATB2
DNA-binding protein SATB.
    
 
 0.667
SOX2
SRY-box transcription factor 2.
    
 
 0.664
EWSR1
EWS RNA binding protein 1.
      
 0.659
CCNA1
CCNA1 isoform 3; Belongs to the cyclin family.
    
 
 0.608
CCNA2
CCNA2 isoform 1; Belongs to the cyclin family.
    
 
 0.597
PDGFD
Platelet derived growth factor D.
      
 0.582
EOMES
EOMES isoform 2.
    
 
 0.574
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.