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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGCZSarcoglycan zeta. (312 aa)    
Predicted Functional Partners:
REEP3
Receptor expression-enhancing protein.
   
 
 0.899
SKAP1
Src kinase associated phosphoprotein 1.
      
 0.891
FBXL17
F-box and leucine rich repeat protein 17.
      
 0.869
FIG4
FIG4 homolog, SAC1 lipid phosphatase domain containing.
      
 0.858
FUT8
Alpha-(1,6)-fucosyltransferase; Catalyzes the addition of fucose in alpha 1-6 linkage to the first GlcNAc residue, next to the peptide chains in N-glycans.
      
 0.839
SGCE
SGCE isoform 9.
   
 0.838
GNB5
GNB5 isoform 1.
      
 0.836
AFF3
AFF3 isoform 5.
      
 0.829
STAU1
Staufen, RNA binding protein, homolog 1.
      
 0.827
SGCB
Sarcoglycan beta.
   
0.821
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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