STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMAT4Zinc finger, matrin-type 4. (229 aa)    
Predicted Functional Partners:
DENND5B
DENN domain containing 5B.
   
  
 0.910
SLC24A3
Solute carrier family 24 (Sodium/potassium/calcium exchanger), member 3; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
   
  
 0.909
ITFG1
Integrin alpha FG-GAP repeat containing 1.
      
 0.908
PPL
PPL isoform 2.
      
 0.699
EVPL
EVPL isoform 2.
      
 0.652
AKT3
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
      
 0.424
RGMA
Repulsive guidance molecule BMP co-receptor a.
   
  
 0.423
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.