STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RP1RP1 axonemal microtubule associated. (2156 aa)    
Predicted Functional Partners:
CDC73
Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog.
   
 0.589
CTR9
Ctr9, Paf1/RNA polymerase II complex component, homolog.
   
 0.527
CINP
Cyclin dependent kinase 2 interacting protein.
   
 0.527
PAF1
Paf1, RNA polymerase II associated factor, homolog.
   
 0.527
STAM
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.
   
 
 0.495
STAM2
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2.
   
 
 0.495
POT1
Protection of telomeres 1 homolog.
    
 
 0.484
CK820_G0011712
POT1 isoform 12.
    
 
 0.484
PDC
PDC isoform 1.
   
 
 0.447
RTF1
Rtf1, Paf1/RNA polymerase II complex component, homolog.
    
 0.438
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.