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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNX16Sorting nexin-16. (344 aa)    
Predicted Functional Partners:
PFKFB3
6-phosphofructo-2-kinase/fructose-2, 6-biphosphatase 3.
      
 0.856
NAALAD2
N-acetylated alpha-linked acidic dipeptidase 2.
    
 
 0.814
ALS2CL
ALS2 C-terminal like.
      
 0.807
ACVRL1
Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
    
 0.778
RGS20
RGS20 isoform 1.
     
 0.700
MMP8
Matrix metallopeptidase 8.
      
 0.659
MAP2K6
Mitogen-activated protein kinase kinase 6; Belongs to the protein kinase superfamily.
      
 0.588
TMEM225
Transmembrane protein 225.
      
 0.548
DHRS12
Dehydrogenase/reductase 12.
      
 0.548
FCHSD2
FCH and double SH3 domains 2.
    
 
 0.524
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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