STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCAF13DDB1 and CUL4 associated factor 13. (597 aa)    
Predicted Functional Partners:
WDR46
WD repeat domain 46.
   
 0.997
UTP11
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
  0.996
NOP14
NOP14 nucleolar protein homolog.
   
 0.996
NOC4L
Nucleolar complex associated 4 homolog.
   
  0.996
KRR1
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.994
UTP4
UTP4 small subunit processome component.
   
 0.993
UTP14A
UTP14A small subunit processome component.
   
 0.993
PDCD11
Programmed cell death 11.
   
  0.992
EMG1
EMG1 isoform 1.
   
  0.992
UTP20
UTP20, small subunit (SSU) processome component, homolog.
   
 0.992
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.