Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DERL1 | FAF1 | ENSPTRP00000035139 | ENSPTRP00000081765 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | Fas (TNFRSF6) associated factor 1. | 0.555 |
DERL1 | FAF2 | ENSPTRP00000035139 | ENSPTRP00000072174 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | Fas associated factor family member 2. | 0.833 |
DERL1 | NPLOC4 | ENSPTRP00000035139 | ENSPTRP00000068574 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | NPL4 homolog, ubiquitin recognition factor. | 0.872 |
DERL1 | SELENOS | ENSPTRP00000035139 | ENSPTRP00000061059 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | SELENOS isoform 5. | 0.990 |
DERL1 | UBXN1 | ENSPTRP00000035139 | ENSPTRP00000006496 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | UBX domain protein 1. | 0.939 |
DERL1 | VCP | ENSPTRP00000035139 | ENSPTRP00000035748 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | Valosin containing protein; Belongs to the AAA ATPase family. | 0.999 |
FAF1 | DERL1 | ENSPTRP00000081765 | ENSPTRP00000035139 | Fas (TNFRSF6) associated factor 1. | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | 0.555 |
FAF1 | FAF2 | ENSPTRP00000081765 | ENSPTRP00000072174 | Fas (TNFRSF6) associated factor 1. | Fas associated factor family member 2. | 0.454 |
FAF1 | NPLOC4 | ENSPTRP00000081765 | ENSPTRP00000068574 | Fas (TNFRSF6) associated factor 1. | NPL4 homolog, ubiquitin recognition factor. | 0.995 |
FAF1 | UBXN1 | ENSPTRP00000081765 | ENSPTRP00000006496 | Fas (TNFRSF6) associated factor 1. | UBX domain protein 1. | 0.995 |
FAF1 | UBXN2A | ENSPTRP00000081765 | ENSPTRP00000020106 | Fas (TNFRSF6) associated factor 1. | UBX domain protein 2A. | 0.463 |
FAF1 | UBXN4 | ENSPTRP00000081765 | ENSPTRP00000042043 | Fas (TNFRSF6) associated factor 1. | UBX domain-containing protein 2. | 0.427 |
FAF1 | UBXN6 | ENSPTRP00000081765 | ENSPTRP00000017528 | Fas (TNFRSF6) associated factor 1. | UBX domain protein 6. | 0.989 |
FAF1 | UBXN7 | ENSPTRP00000081765 | ENSPTRP00000077476 | Fas (TNFRSF6) associated factor 1. | UBX domain-containing protein 7. | 0.993 |
FAF1 | VCP | ENSPTRP00000081765 | ENSPTRP00000035748 | Fas (TNFRSF6) associated factor 1. | Valosin containing protein; Belongs to the AAA ATPase family. | 0.999 |
FAF2 | DERL1 | ENSPTRP00000072174 | ENSPTRP00000035139 | Fas associated factor family member 2. | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | 0.833 |
FAF2 | FAF1 | ENSPTRP00000072174 | ENSPTRP00000081765 | Fas associated factor family member 2. | Fas (TNFRSF6) associated factor 1. | 0.454 |
FAF2 | NPLOC4 | ENSPTRP00000072174 | ENSPTRP00000068574 | Fas associated factor family member 2. | NPL4 homolog, ubiquitin recognition factor. | 0.996 |
FAF2 | SELENOS | ENSPTRP00000072174 | ENSPTRP00000061059 | Fas associated factor family member 2. | SELENOS isoform 5. | 0.758 |
FAF2 | UBXN1 | ENSPTRP00000072174 | ENSPTRP00000006496 | Fas associated factor family member 2. | UBX domain protein 1. | 0.994 |
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