STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDF1Endothelial differentiation related factor 1. (141 aa)    
Predicted Functional Partners:
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.862
LOC468581
ubiquitin-60S ribosomal protein L40-like.
   
   0.862
RPS3
RPS3 isoform 13; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.855
LOC101057058
40S ribosomal protein S3 pseudogene.
  
 
 0.839
LOC104001113
RPS10-NUDT3 isoform 1.
   
 
 0.832
ENSPTRP00000070129
Small subunit ribosomal protein S10e.
   
 
 0.832
LOC101058615
40S ribosomal protein S10 pseudogene.
   
 
 0.832
ENSPTRP00000092239
annotation not available
   
 
 0.832
RACK1
Receptor for activated C kinase 1.
   
 
 0.828
LOC458388
RPS21 isoform 1.
   
 
 0.807
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.