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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LCN12LCN12 isoform 9; Belongs to the calycin superfamily. Lipocalin family. (192 aa)    
Predicted Functional Partners:
LCN9
LOW QUALITY PROTEIN: epididymal-specific lipocalin-9.
   
 
 0.668
CDC73
Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog.
   
 0.589
PAF1
Paf1, RNA polymerase II associated factor, homolog.
   
 0.527
CTR9
Ctr9, Paf1/RNA polymerase II complex component, homolog.
    
 0.525
CINP
Cyclin dependent kinase 2 interacting protein.
    
 0.525
CCDC183
Coiled-coil domain containing 183.
      
 0.463
TMEM141
TMEM141 isoform 1.
      
 0.459
LCN15
LCN15 isoform 2; Belongs to the calycin superfamily. Lipocalin family.
     
 0.451
RTF1
Rtf1, Paf1/RNA polymerase II complex component, homolog.
    
 0.438
CK820_G0012002
LCN8 isoform 1; Belongs to the calycin superfamily. Lipocalin family.
   
  
 0.428
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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