GYPC protein (Pan troglodytes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Pan troglodytes

NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACKR1	BSG	ENSPTRP00000002561	ENSPTRP00000017253	Atypical chemokine receptor 1; Atypical chemokine receptor that controls chemokine levels and localization via high-affinity chemokine binding that is uncoupled from classic ligand-driven signal transduction cascades, resulting instead in chemokine sequestration, degradation, or transcytosis. Also known as interceptor (internalizing receptor) or chemokine-scavenging receptor or chemokine decoy receptor. Has a promiscuous chemokine- binding profile, interacting with inflammatory chemokines of both the CXC and the CC subfamilies but not with homeostatic chemokines. Acts as a receptor for [...]	BSG isoform 8.	0.582
ACKR1	GYPA	ENSPTRP00000002561	ENSPTRP00000028288	Atypical chemokine receptor 1; Atypical chemokine receptor that controls chemokine levels and localization via high-affinity chemokine binding that is uncoupled from classic ligand-driven signal transduction cascades, resulting instead in chemokine sequestration, degradation, or transcytosis. Also known as interceptor (internalizing receptor) or chemokine-scavenging receptor or chemokine decoy receptor. Has a promiscuous chemokine- binding profile, interacting with inflammatory chemokines of both the CXC and the CC subfamilies but not with homeostatic chemokines. Acts as a receptor for [...]	Glycophorin-A; Glycophorin A is the major intrinsic membrane protein of the erythrocyte. Appears to be important for the function of SLC4A1 and is required for high activity of SLC4A1. May be involved in translocation of SLC4A1 to the plasma membrane (By similarity).	0.598
ACKR1	GYPB	ENSPTRP00000002561	ENSPTRP00000087172	Atypical chemokine receptor 1; Atypical chemokine receptor that controls chemokine levels and localization via high-affinity chemokine binding that is uncoupled from classic ligand-driven signal transduction cascades, resulting instead in chemokine sequestration, degradation, or transcytosis. Also known as interceptor (internalizing receptor) or chemokine-scavenging receptor or chemokine decoy receptor. Has a promiscuous chemokine- binding profile, interacting with inflammatory chemokines of both the CXC and the CC subfamilies but not with homeostatic chemokines. Acts as a receptor for [...]	Glycophorin-B; This protein is a minor sialoglycoprotein in erythrocyte membranes.	0.438
ACKR1	GYPC	ENSPTRP00000002561	ENSPTRP00000039095	Atypical chemokine receptor 1; Atypical chemokine receptor that controls chemokine levels and localization via high-affinity chemokine binding that is uncoupled from classic ligand-driven signal transduction cascades, resulting instead in chemokine sequestration, degradation, or transcytosis. Also known as interceptor (internalizing receptor) or chemokine-scavenging receptor or chemokine decoy receptor. Has a promiscuous chemokine- binding profile, interacting with inflammatory chemokines of both the CXC and the CC subfamilies but not with homeostatic chemokines. Acts as a receptor for [...]	Glycophorin.	0.714
BSG	ACKR1	ENSPTRP00000017253	ENSPTRP00000002561	BSG isoform 8.	Atypical chemokine receptor 1; Atypical chemokine receptor that controls chemokine levels and localization via high-affinity chemokine binding that is uncoupled from classic ligand-driven signal transduction cascades, resulting instead in chemokine sequestration, degradation, or transcytosis. Also known as interceptor (internalizing receptor) or chemokine-scavenging receptor or chemokine decoy receptor. Has a promiscuous chemokine- binding profile, interacting with inflammatory chemokines of both the CXC and the CC subfamilies but not with homeostatic chemokines. Acts as a receptor for [...]	0.582
BSG	GYPA	ENSPTRP00000017253	ENSPTRP00000028288	BSG isoform 8.	Glycophorin-A; Glycophorin A is the major intrinsic membrane protein of the erythrocyte. Appears to be important for the function of SLC4A1 and is required for high activity of SLC4A1. May be involved in translocation of SLC4A1 to the plasma membrane (By similarity).	0.627
BSG	GYPB	ENSPTRP00000017253	ENSPTRP00000087172	BSG isoform 8.	Glycophorin-B; This protein is a minor sialoglycoprotein in erythrocyte membranes.	0.421
BSG	GYPC	ENSPTRP00000017253	ENSPTRP00000039095	BSG isoform 8.	Glycophorin.	0.804
CNTN1	GYPC	ENSPTRP00000075546	ENSPTRP00000039095	CNTN1 isoform 1.	Glycophorin.	0.641
CNTN1	NFASC	ENSPTRP00000075546	ENSPTRP00000088372	CNTN1 isoform 1.	NFASC isoform 1.	0.986
EPB41	GYPC	ENSPTRP00000040508	ENSPTRP00000039095	Erythrocyte membrane protein band 4.1.	Glycophorin.	0.624
EPB41	TMOD1	ENSPTRP00000040508	ENSPTRP00000040338	Erythrocyte membrane protein band 4.1.	TMOD1 isoform 1.	0.824
GET1	GYPC	ENSPTRP00000023947	ENSPTRP00000039095	WRB isoform 1.	Glycophorin.	0.613
GYPA	ACKR1	ENSPTRP00000028288	ENSPTRP00000002561	Glycophorin-A; Glycophorin A is the major intrinsic membrane protein of the erythrocyte. Appears to be important for the function of SLC4A1 and is required for high activity of SLC4A1. May be involved in translocation of SLC4A1 to the plasma membrane (By similarity).	Atypical chemokine receptor 1; Atypical chemokine receptor that controls chemokine levels and localization via high-affinity chemokine binding that is uncoupled from classic ligand-driven signal transduction cascades, resulting instead in chemokine sequestration, degradation, or transcytosis. Also known as interceptor (internalizing receptor) or chemokine-scavenging receptor or chemokine decoy receptor. Has a promiscuous chemokine- binding profile, interacting with inflammatory chemokines of both the CXC and the CC subfamilies but not with homeostatic chemokines. Acts as a receptor for [...]	0.598
GYPA	BSG	ENSPTRP00000028288	ENSPTRP00000017253	Glycophorin-A; Glycophorin A is the major intrinsic membrane protein of the erythrocyte. Appears to be important for the function of SLC4A1 and is required for high activity of SLC4A1. May be involved in translocation of SLC4A1 to the plasma membrane (By similarity).	BSG isoform 8.	0.627
GYPA	GYPB	ENSPTRP00000028288	ENSPTRP00000087172	Glycophorin-A; Glycophorin A is the major intrinsic membrane protein of the erythrocyte. Appears to be important for the function of SLC4A1 and is required for high activity of SLC4A1. May be involved in translocation of SLC4A1 to the plasma membrane (By similarity).	Glycophorin-B; This protein is a minor sialoglycoprotein in erythrocyte membranes.	0.902
GYPA	GYPC	ENSPTRP00000028288	ENSPTRP00000039095	Glycophorin-A; Glycophorin A is the major intrinsic membrane protein of the erythrocyte. Appears to be important for the function of SLC4A1 and is required for high activity of SLC4A1. May be involved in translocation of SLC4A1 to the plasma membrane (By similarity).	Glycophorin.	0.807
GYPB	ACKR1	ENSPTRP00000087172	ENSPTRP00000002561	Glycophorin-B; This protein is a minor sialoglycoprotein in erythrocyte membranes.	Atypical chemokine receptor 1; Atypical chemokine receptor that controls chemokine levels and localization via high-affinity chemokine binding that is uncoupled from classic ligand-driven signal transduction cascades, resulting instead in chemokine sequestration, degradation, or transcytosis. Also known as interceptor (internalizing receptor) or chemokine-scavenging receptor or chemokine decoy receptor. Has a promiscuous chemokine- binding profile, interacting with inflammatory chemokines of both the CXC and the CC subfamilies but not with homeostatic chemokines. Acts as a receptor for [...]	0.438
GYPB	BSG	ENSPTRP00000087172	ENSPTRP00000017253	Glycophorin-B; This protein is a minor sialoglycoprotein in erythrocyte membranes.	BSG isoform 8.	0.421
GYPB	GYPA	ENSPTRP00000087172	ENSPTRP00000028288	Glycophorin-B; This protein is a minor sialoglycoprotein in erythrocyte membranes.	Glycophorin-A; Glycophorin A is the major intrinsic membrane protein of the erythrocyte. Appears to be important for the function of SLC4A1 and is required for high activity of SLC4A1. May be involved in translocation of SLC4A1 to the plasma membrane (By similarity).	0.902