XAB2 protein (Pan troglodytes) - STRING interaction network

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gene neighborhood

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textmining

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Score

XAB2

XPA binding protein 2. (855 aa)

Predicted Functional Partners:

CRNKL1

0.999

AQR

0.998

PRPF19

0.998

PPIE

0.998

SYF2

0.997

SF3B2

0.997

DHX16

0.997

ISY1

0.993

RBM22

0.993

BUD31

0.988

Your Current Organism:

Pan troglodytes

NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AQR	BUD31	ENSPTRP00000011771	ENSPTRP00000033279	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	BUD31 isoform 1.	0.987
AQR	CRNKL1	ENSPTRP00000011771	ENSPTRP00000052333	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	Crooked neck pre-mRNA splicing factor 1.	0.995
AQR	DHX16	ENSPTRP00000011771	ENSPTRP00000080638	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16; Required for pre-mRNA splicing as component of the spliceosome. Contributes to pre-mRNA splicing after spliceosome formation and prior to the first transesterification reaction. Belongs to the DEAD box helicase family. DEAH subfamily. DDX16/PRP8 sub-subfamily.	0.851
AQR	ISY1	ENSPTRP00000011771	ENSPTRP00000026473	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	ISY1 splicing factor homolog.	0.982
AQR	PPIE	ENSPTRP00000011771	ENSPTRP00000091145	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily.	0.997
AQR	PRPF19	ENSPTRP00000011771	ENSPTRP00000089367	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	PRP19/PSO4 pre-mRNA processing factor 19 homolog.	0.996
AQR	RBM22	ENSPTRP00000011771	ENSPTRP00000091243	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	RNA binding motif protein 22.	0.996
AQR	SF3B2	ENSPTRP00000011771	ENSPTRP00000069263	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	Splicing factor 3b, subunit 2, 145kDa.	0.757
AQR	SYF2	ENSPTRP00000011771	ENSPTRP00000000615	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	SYF2 homolog, RNA splicing factor.	0.951
AQR	XAB2	ENSPTRP00000011771	ENSPTRP00000039383	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	XPA binding protein 2.	0.998
BUD31	AQR	ENSPTRP00000033279	ENSPTRP00000011771	BUD31 isoform 1.	RNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.	0.987
BUD31	CRNKL1	ENSPTRP00000033279	ENSPTRP00000052333	BUD31 isoform 1.	Crooked neck pre-mRNA splicing factor 1.	0.987
BUD31	DHX16	ENSPTRP00000033279	ENSPTRP00000080638	BUD31 isoform 1.	Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16; Required for pre-mRNA splicing as component of the spliceosome. Contributes to pre-mRNA splicing after spliceosome formation and prior to the first transesterification reaction. Belongs to the DEAD box helicase family. DEAH subfamily. DDX16/PRP8 sub-subfamily.	0.806
BUD31	ISY1	ENSPTRP00000033279	ENSPTRP00000026473	BUD31 isoform 1.	ISY1 splicing factor homolog.	0.982
BUD31	PPIE	ENSPTRP00000033279	ENSPTRP00000091145	BUD31 isoform 1.	Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily.	0.992
BUD31	PRPF19	ENSPTRP00000033279	ENSPTRP00000089367	BUD31 isoform 1.	PRP19/PSO4 pre-mRNA processing factor 19 homolog.	0.945
BUD31	RBM22	ENSPTRP00000033279	ENSPTRP00000091243	BUD31 isoform 1.	RNA binding motif protein 22.	0.994
BUD31	SF3B2	ENSPTRP00000033279	ENSPTRP00000069263	BUD31 isoform 1.	Splicing factor 3b, subunit 2, 145kDa.	0.827
BUD31	SYF2	ENSPTRP00000033279	ENSPTRP00000000615	BUD31 isoform 1.	SYF2 homolog, RNA splicing factor.	0.950
BUD31	XAB2	ENSPTRP00000033279	ENSPTRP00000039383	BUD31 isoform 1.	XPA binding protein 2.	0.988