| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CCNK | RFX4 | ENSPTRP00000061716 | ENSPTRP00000076256 | CCNK isoform 2; Belongs to the cyclin family. | Regulatory factor X4. | 0.527 |
| CCNK | RFX7 | ENSPTRP00000061716 | ENSPTRP00000090900 | CCNK isoform 2; Belongs to the cyclin family. | Regulatory factor X, 7. | 0.662 |
| CCNK | RFXANK | ENSPTRP00000061716 | ENSPTRP00000018310 | CCNK isoform 2; Belongs to the cyclin family. | Regulatory factor X-associated ankyrin-containing protein. | 0.621 |
| CCNK | RFXAP | ENSPTRP00000061716 | ENSPTRP00000009853 | CCNK isoform 2; Belongs to the cyclin family. | Regulatory factor X associated protein. | 0.547 |
| CCNK | SS18L1 | ENSPTRP00000061716 | ENSPTRP00000023575 | CCNK isoform 2; Belongs to the cyclin family. | Synovial sarcoma translocation gene on chromosome 18-like 1. | 0.645 |
| MNX1 | RFX4 | ENSPTRP00000047521 | ENSPTRP00000076256 | Motor neuron and pancreas homeobox 1. | Regulatory factor X4. | 0.546 |
| MNX1 | TBX20 | ENSPTRP00000047521 | ENSPTRP00000032592 | Motor neuron and pancreas homeobox 1. | T-box transcription factor 20. | 0.595 |
| NFYB | PKNOX2 | ENSPTRP00000093306 | ENSPTRP00000007586 | Nuclear transcription factor Y subunit beta. | PBX/knotted 1 homeobox 2. | 0.594 |
| NFYB | RFX4 | ENSPTRP00000093306 | ENSPTRP00000076256 | Nuclear transcription factor Y subunit beta. | Regulatory factor X4. | 0.553 |
| NFYB | RFXANK | ENSPTRP00000093306 | ENSPTRP00000018310 | Nuclear transcription factor Y subunit beta. | Regulatory factor X-associated ankyrin-containing protein. | 0.450 |
| NFYB | RFXAP | ENSPTRP00000093306 | ENSPTRP00000009853 | Nuclear transcription factor Y subunit beta. | Regulatory factor X associated protein. | 0.420 |
| PKNOX2 | NFYB | ENSPTRP00000007586 | ENSPTRP00000093306 | PBX/knotted 1 homeobox 2. | Nuclear transcription factor Y subunit beta. | 0.594 |
| PKNOX2 | RFX4 | ENSPTRP00000007586 | ENSPTRP00000076256 | PBX/knotted 1 homeobox 2. | Regulatory factor X4. | 0.713 |
| PKNOX2 | SPATA24 | ENSPTRP00000007586 | ENSPTRP00000029574 | PBX/knotted 1 homeobox 2. | Spermatogenesis associated 24. | 0.570 |
| RFX4 | CCNK | ENSPTRP00000076256 | ENSPTRP00000061716 | Regulatory factor X4. | CCNK isoform 2; Belongs to the cyclin family. | 0.527 |
| RFX4 | MNX1 | ENSPTRP00000076256 | ENSPTRP00000047521 | Regulatory factor X4. | Motor neuron and pancreas homeobox 1. | 0.546 |
| RFX4 | NFYB | ENSPTRP00000076256 | ENSPTRP00000093306 | Regulatory factor X4. | Nuclear transcription factor Y subunit beta. | 0.553 |
| RFX4 | PKNOX2 | ENSPTRP00000076256 | ENSPTRP00000007586 | Regulatory factor X4. | PBX/knotted 1 homeobox 2. | 0.713 |
| RFX4 | RFX7 | ENSPTRP00000076256 | ENSPTRP00000090900 | Regulatory factor X4. | Regulatory factor X, 7. | 0.857 |
| RFX4 | RFXANK | ENSPTRP00000076256 | ENSPTRP00000018310 | Regulatory factor X4. | Regulatory factor X-associated ankyrin-containing protein. | 0.644 |
