Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATXN7L3 | BAHD1 | ENSPTRP00000069746 | ENSPTRP00000042280 | Ataxin-7-like protein 3; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates both histones H2A and H2B. The SAGA complex is recruited to specific gene promoters by activators such as MYC, where it is required for transcription. Required for nuclear receptor-mediated transactivation. Within the complex, it is required to recruit USP22 and EN [...] | Bromo adjacent homology domain containing 1. | 0.797 |
BAHD1 | ATXN7L3 | ENSPTRP00000042280 | ENSPTRP00000069746 | Bromo adjacent homology domain containing 1. | Ataxin-7-like protein 3; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates both histones H2A and H2B. The SAGA complex is recruited to specific gene promoters by activators such as MYC, where it is required for transcription. Required for nuclear receptor-mediated transactivation. Within the complex, it is required to recruit USP22 and EN [...] | 0.797 |
BAHD1 | FNDC3B | ENSPTRP00000042280 | ENSPTRP00000085005 | Bromo adjacent homology domain containing 1. | Fibronectin type III domain containing 3B. | 0.733 |
BAHD1 | HDAC5 | ENSPTRP00000042280 | ENSPTRP00000015756 | Bromo adjacent homology domain containing 1. | Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. | 0.580 |
BAHD1 | LOC748850 | ENSPTRP00000042280 | ENSPTRP00000067224 | Bromo adjacent homology domain containing 1. | HDAC2 isoform 9. | 0.555 |
BAHD1 | MBOAT4 | ENSPTRP00000042280 | ENSPTRP00000034460 | Bromo adjacent homology domain containing 1. | MBOAT4 isoform 1; Belongs to the membrane-bound acyltransferase family. | 0.813 |
BAHD1 | MIER3 | ENSPTRP00000042280 | ENSPTRP00000028933 | Bromo adjacent homology domain containing 1. | MIER family member 3. | 0.616 |
BAHD1 | MLN | ENSPTRP00000042280 | ENSPTRP00000077901 | Bromo adjacent homology domain containing 1. | MLN isoform 2. | 0.706 |
BAHD1 | PPP1R35 | ENSPTRP00000042280 | ENSPTRP00000033359 | Bromo adjacent homology domain containing 1. | Protein phosphatase 1 regulatory subunit 35. | 0.839 |
BAHD1 | TATDN2 | ENSPTRP00000042280 | ENSPTRP00000025213 | Bromo adjacent homology domain containing 1. | T0086887 isoform 1. | 0.780 |
BAHD1 | ZNF282 | ENSPTRP00000042280 | ENSPTRP00000033982 | Bromo adjacent homology domain containing 1. | ZNF282 isoform 1. | 0.829 |
FNDC3B | BAHD1 | ENSPTRP00000085005 | ENSPTRP00000042280 | Fibronectin type III domain containing 3B. | Bromo adjacent homology domain containing 1. | 0.733 |
FNDC3B | MBOAT4 | ENSPTRP00000085005 | ENSPTRP00000034460 | Fibronectin type III domain containing 3B. | MBOAT4 isoform 1; Belongs to the membrane-bound acyltransferase family. | 0.694 |
FNDC3B | MLN | ENSPTRP00000085005 | ENSPTRP00000077901 | Fibronectin type III domain containing 3B. | MLN isoform 2. | 0.739 |
FNDC3B | PPP1R35 | ENSPTRP00000085005 | ENSPTRP00000033359 | Fibronectin type III domain containing 3B. | Protein phosphatase 1 regulatory subunit 35. | 0.697 |
FNDC3B | TATDN2 | ENSPTRP00000085005 | ENSPTRP00000025213 | Fibronectin type III domain containing 3B. | T0086887 isoform 1. | 0.608 |
HDAC5 | BAHD1 | ENSPTRP00000015756 | ENSPTRP00000042280 | Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. | Bromo adjacent homology domain containing 1. | 0.580 |
HDAC5 | LOC748850 | ENSPTRP00000015756 | ENSPTRP00000067224 | Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. | HDAC2 isoform 9. | 0.487 |
LOC748850 | BAHD1 | ENSPTRP00000067224 | ENSPTRP00000042280 | HDAC2 isoform 9. | Bromo adjacent homology domain containing 1. | 0.555 |
LOC748850 | HDAC5 | ENSPTRP00000067224 | ENSPTRP00000015756 | HDAC2 isoform 9. | Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. | 0.487 |
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