STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBFOX1RNA binding fox-1 homolog 1. (582 aa)    
Predicted Functional Partners:
ATXN2
ATXN2 isoform 2.
    
 
 0.871
GCM1
Glial cells missing transcription factor 1.
      
 0.767
RBM24
RNA binding motif protein 24.
  
 
 0.748
RBPMS
RNA binding protein, mRNA processing factor.
   
 
 0.677
RBM38
RNA binding motif protein 38.
  
 
 0.652
QKI
QKI, KH domain containing RNA binding.
   
 
 0.645
CK820_G0048817
RBM38 isoform 2.
  
 
 0.644
ELAVL2
ELAV-like protein; Belongs to the RRM elav family.
  
 
 0.636
NPAS3
NPAS3 isoform 1.
      
 0.616
CK820_G0054728
MECP2 isoform 14.
     
 0.614
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.