STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSPEARThrombospondin type laminin G domain and EAR repeats. (669 aa)    
Predicted Functional Partners:
CEACAM16
Carcinoembryonic antigen related cell adhesion molecule 16.
    
 0.814
SMPX
Small muscle protein, X-linked.
      
 0.802
GPSM2
G-protein-signaling modulator 2.
     
 0.789
HSD17B4
Hydroxysteroid (17-beta) dehydrogenase 4.
   
  
 0.782
TPRN
TPRN isoform 2.
      
 0.622
MASP1
Mannan binding lectin serine peptidase 1.
    
 0.560
DNMT1
DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
      
 0.536
DNMT1-2
DNA methyltransferase 1.
      
 0.536
SUPT3H
SPT3 homolog, SAGA and STAGA complex component.
    
 0.531
PHETA1
FAM109A isoform 1.
      
 0.506
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.