STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE1GLE1 RNA export mediator homolog. (690 aa)    
Predicted Functional Partners:
NUP214
NUP214 isoform 1.
    
 0.977
RAE1
RAE1 RNA export 1 homolog.
   
 0.976
NUP155
Nucleoporin 155kDa.
   
 0.956
NUP88
NUP88 isoform 1.
    
 0.929
NUP107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.908
NUP98
Nucleoporin 98kDa.
    
 0.898
NUP42
NUPL2 isoform 7.
   
 0.887
NUP54
Nucleoporin 54kDa.
   
 0.878
NUP133
NUP133 isoform 1.
   
 0.876
NUP85
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.868
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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