STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCA8ABCA8 isoform 3. (1621 aa)    
Predicted Functional Partners:
SPARCL1
SPARCL1 isoform 2.
   
  
 0.668
SLC22A8
Solute carrier family 22 member 8.
    
 
 0.608
CBLN2
Cerebellin 2 precursor.
    
 
 0.599
ABCC1
ATP binding cassette subfamily C member 1.
  
0.486
ABCA6
ATP-binding cassette, sub-family A (ABC1), member 6.
  
 
0.482
ABCC9
ATP-binding cassette, sub-family C (CFTR/MRP), member 9.
  
 0.480
AQP4
AQP4 isoform 1; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
  
 0.471
OPALIN
Oligodendrocytic myelin paranodal and inner loop protein.
      
 0.417
GAD1
Glutamate decarboxylase 1; Catalyzes the production of GABA; Belongs to the group II decarboxylase family.
  
 
 0.403
MOBP
Myelin associated oligodendrocyte basic protein.
   
  
 0.401
Your Current Organism:
Pan troglodytes
NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.