RTP2 protein (Pan troglodytes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Pan troglodytes

NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANO2	CNGA2	ENSPTRP00000080790	ENSPTRP00000038551	Anoctamin.	Cyclic nucleotide gated channel subunit alpha 2.	0.798
ANO2	CNGA2-2	ENSPTRP00000080790	ENSPTRP00000077649	Anoctamin.	Cyclic nucleotide gated channel subunit alpha 2.	0.798
ANO2	CNGA4	ENSPTRP00000080790	ENSPTRP00000048271	Anoctamin.	Cyclic nucleotide gated channel subunit alpha 4.	0.661
ANO2	RTP2	ENSPTRP00000080790	ENSPTRP00000045318	Anoctamin.	Receptor transporter protein 2.	0.785
CHCHD1	RTP2	ENSPTRP00000004581	ENSPTRP00000045318	Coiled-coil-helix-coiled-coil-helix domain containing 1.	Receptor transporter protein 2.	0.618
CHRM1	OR1A1	ENSPTRP00000006519	ENSPTRP00000014611	Muscarinic acetylcholine receptor; The muscarinic acetylcholine receptor mediates various cellular responses, including inhibition of adenylate cyclase, breakdown of phosphoinositides and modulation of potassium channels through the action of G proteins.	Olfactory receptor 1A1; Odorant receptor; Belongs to the G-protein coupled receptor 1 family.	0.633
CHRM1	RIC8B	ENSPTRP00000006519	ENSPTRP00000054791	Muscarinic acetylcholine receptor; The muscarinic acetylcholine receptor mediates various cellular responses, including inhibition of adenylate cyclase, breakdown of phosphoinositides and modulation of potassium channels through the action of G proteins.	RIC8B isoform 2.	0.628
CHRM1	RTP2	ENSPTRP00000006519	ENSPTRP00000045318	Muscarinic acetylcholine receptor; The muscarinic acetylcholine receptor mediates various cellular responses, including inhibition of adenylate cyclase, breakdown of phosphoinositides and modulation of potassium channels through the action of G proteins.	Receptor transporter protein 2.	0.828
CHRM4	OR1A1	ENSPTRP00000060526	ENSPTRP00000014611	Muscarinic acetylcholine receptor; The muscarinic acetylcholine receptor mediates various cellular responses, including inhibition of adenylate cyclase, breakdown of phosphoinositides and modulation of potassium channels through the action of G proteins.	Olfactory receptor 1A1; Odorant receptor; Belongs to the G-protein coupled receptor 1 family.	0.662
CHRM4	RIC8B	ENSPTRP00000060526	ENSPTRP00000054791	Muscarinic acetylcholine receptor; The muscarinic acetylcholine receptor mediates various cellular responses, including inhibition of adenylate cyclase, breakdown of phosphoinositides and modulation of potassium channels through the action of G proteins.	RIC8B isoform 2.	0.745
CHRM4	RTP2	ENSPTRP00000060526	ENSPTRP00000045318	Muscarinic acetylcholine receptor; The muscarinic acetylcholine receptor mediates various cellular responses, including inhibition of adenylate cyclase, breakdown of phosphoinositides and modulation of potassium channels through the action of G proteins.	Receptor transporter protein 2.	0.837
CNGA2	ANO2	ENSPTRP00000038551	ENSPTRP00000080790	Cyclic nucleotide gated channel subunit alpha 2.	Anoctamin.	0.798
CNGA2	CNGA4	ENSPTRP00000038551	ENSPTRP00000048271	Cyclic nucleotide gated channel subunit alpha 2.	Cyclic nucleotide gated channel subunit alpha 4.	0.995
CNGA2	RTP2	ENSPTRP00000038551	ENSPTRP00000045318	Cyclic nucleotide gated channel subunit alpha 2.	Receptor transporter protein 2.	0.805
CNGA2-2	ANO2	ENSPTRP00000077649	ENSPTRP00000080790	Cyclic nucleotide gated channel subunit alpha 2.	Anoctamin.	0.798
CNGA2-2	CNGA4	ENSPTRP00000077649	ENSPTRP00000048271	Cyclic nucleotide gated channel subunit alpha 2.	Cyclic nucleotide gated channel subunit alpha 4.	0.952
CNGA2-2	RTP2	ENSPTRP00000077649	ENSPTRP00000045318	Cyclic nucleotide gated channel subunit alpha 2.	Receptor transporter protein 2.	0.755
CNGA4	ANO2	ENSPTRP00000048271	ENSPTRP00000080790	Cyclic nucleotide gated channel subunit alpha 4.	Anoctamin.	0.661
CNGA4	CNGA2	ENSPTRP00000048271	ENSPTRP00000038551	Cyclic nucleotide gated channel subunit alpha 4.	Cyclic nucleotide gated channel subunit alpha 2.	0.995
CNGA4	CNGA2-2	ENSPTRP00000048271	ENSPTRP00000077649	Cyclic nucleotide gated channel subunit alpha 4.	Cyclic nucleotide gated channel subunit alpha 2.	0.952