TAF9B protein (Pan troglodytes) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Pan troglodytes

NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CK820_G0037203	LINC02218	ENSPTRP00000023561	ENSPTRP00000066844	TAF4 isoform 5.	Long intergenic non-protein coding RNA 2218.	0.989
CK820_G0037203	TAF1	ENSPTRP00000023561	ENSPTRP00000090345	TAF4 isoform 5.	Transcription initiation factor TFIID subunit.	0.995
CK820_G0037203	TAF10	ENSPTRP00000023561	ENSPTRP00000060099	TAF4 isoform 5.	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	0.996
CK820_G0037203	TAF11	ENSPTRP00000023561	ENSPTRP00000030871	TAF4 isoform 5.	TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa.	0.993
CK820_G0037203	TAF12	ENSPTRP00000023561	ENSPTRP00000000760	TAF4 isoform 5.	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa.	0.978
CK820_G0037203	TAF2	ENSPTRP00000023561	ENSPTRP00000053071	TAF4 isoform 5.	TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa.	0.993
CK820_G0037203	TAF4	ENSPTRP00000023561	ENSPTRP00000059890	TAF4 isoform 5.	TATA-box binding protein associated factor 4.	0.900
CK820_G0037203	TAF6	ENSPTRP00000023561	ENSPTRP00000063219	TAF4 isoform 5.	TATA-box binding protein associated factor 6.	0.980
CK820_G0037203	TAF7L	ENSPTRP00000023561	ENSPTRP00000080258	TAF4 isoform 5.	TATA-box binding protein associated factor 7 like.	0.991
CK820_G0037203	TAF9B	ENSPTRP00000023561	ENSPTRP00000047355	TAF4 isoform 5.	TAF9B isoform 1.	0.989
LINC02218	CK820_G0037203	ENSPTRP00000066844	ENSPTRP00000023561	Long intergenic non-protein coding RNA 2218.	TAF4 isoform 5.	0.989
LINC02218	TAF1	ENSPTRP00000066844	ENSPTRP00000090345	Long intergenic non-protein coding RNA 2218.	Transcription initiation factor TFIID subunit.	0.996
LINC02218	TAF10	ENSPTRP00000066844	ENSPTRP00000060099	Long intergenic non-protein coding RNA 2218.	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	0.997
LINC02218	TAF11	ENSPTRP00000066844	ENSPTRP00000030871	Long intergenic non-protein coding RNA 2218.	TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa.	0.902
LINC02218	TAF12	ENSPTRP00000066844	ENSPTRP00000000760	Long intergenic non-protein coding RNA 2218.	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa.	0.983
LINC02218	TAF2	ENSPTRP00000066844	ENSPTRP00000053071	Long intergenic non-protein coding RNA 2218.	TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa.	0.997
LINC02218	TAF4	ENSPTRP00000066844	ENSPTRP00000059890	Long intergenic non-protein coding RNA 2218.	TATA-box binding protein associated factor 4.	0.989
LINC02218	TAF6	ENSPTRP00000066844	ENSPTRP00000063219	Long intergenic non-protein coding RNA 2218.	TATA-box binding protein associated factor 6.	0.981
LINC02218	TAF7L	ENSPTRP00000066844	ENSPTRP00000080258	Long intergenic non-protein coding RNA 2218.	TATA-box binding protein associated factor 7 like.	0.995
LINC02218	TAF9B	ENSPTRP00000066844	ENSPTRP00000047355	Long intergenic non-protein coding RNA 2218.	TAF9B isoform 1.	0.987